cis; CATGCAA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
TCCATAGCCATGCAWRCTGMAGAATGTC LEGUMINBOXLEGA5 [ref] [ref]
        CATGCA               RYREPEATBNNAPA [ref] [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CATGCAA

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CATGCAA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.53At3g24650abscisic acid-insensitive protein 3 (ABI3) ((ABI3)) ABI3VP1
0.51At5g07500zinc finger (CCCH-type) family protein ((PEI1)) C2H2
0.50At3g26790transcriptional regulator (FUSCA3) ((FUS3)) ABI3VP1
-0.50At5g64340expressed protein BHLH
-0.48At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
-0.48At5g09460expressed protein BHLH
0.48At3g56660bZIP transcription factor family protein bZIP
-0.47At5g16070chaperonin, putative TCP
0.46At1g75490DRE-binding transcription factor, putative AP2-EREBP
0.45At5g47670CCAAT-box binding transcription factor family protein / leafy cotyledon 1-related (L1L) CCAAT-HAP3
-0.45At4g13640myb family transcription factor G2-like
0.45At3g15510no apical meristem (NAM) family protein (NAC2) ((ATNAC2)) NAC
0.45At1g77950MADS-box family protein MADS
0.45At3g44460basic leucine zipper transcription factor (BZIP67) ((DPBF2)) bZIP
0.45At3g13540myb family transcription factor ((ATMYB5)) MYB

link to other 304 cis elements in ATTED

similar seq.
CATGCAA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TTGCATG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CATGCAA1.000.0986
CCATGCA0.810.0862
TGCATGT0.690.0760
TGCATGC0.680.0849
GCCATGC0.680.0717
CTCATGC0.670.0677
CATGTCA0.640.0733
CATGCAT0.610.0743