cis; CATGTCA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CATGTCA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CATGTCA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.50At1g69490no apical meristem (NAM) family protein ((NAP)) NAC
0.49At3g20770ethylene-insensitive 3 (EIN3) ((EIN3)) EIL
0.48At2g37150zinc finger (C3HC4-type RING finger) family protein C3H
0.47At5g39610no apical meristem (NAM) family protein NAC
0.46At5g13820telomeric DNA-binding protein 1 (TBP1) ((HPPBF-1, TBP1)) MYB-related
0.46At2g46270G-box binding factor 3 (GBF3) ((GBF3)) bZIP
-0.46At3g06140zinc finger (C3HC4-type RING finger) family protein C3H
0.46At3g04070no apical meristem (NAM) family protein NAC
0.45At2g46680homeobox-leucine zipper protein 7 (HB-7) / HD-ZIP transcription factor 7 ((ATHB-7)) Homeobox
0.44At1g28520expressed protein VOZ-9
0.44At3g04060no apical meristem (NAM) family protein NAC
0.44At5g55970zinc finger (C3HC4-type RING finger) family protein C3H
0.44At1g34190no apical meristem (NAM) family protein NAC
0.44At1g07530scarecrow-like transcription factor 14 (SCL14) GRAS
-0.43At1g14410DNA-binding protein-related WHIRLY

link to other 304 cis elements in ATTED

similar seq.
←CATGTCA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGACATG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CATGTCA1.000.0733
TGCATGT0.720.0760
GCATGTC0.680.0663
CATGCAA0.640.0986