cis; CGTGTCA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CGTGTCA

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CGTGTCA.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.59At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.59At5g12840CCAAT-binding transcription factor (CBF-B/NF-YA) family protein ((HAP2A)) CCAAT-HAP2
0.53At3g19290ABA-responsive element-binding protein 2 (AREB2) ((ABF4, AREB2)) bZIP
0.51At5g47390myb family transcription factor MYB-related
0.51At5g60850Dof-type zinc finger domain-containing protein ((OBP4)) C2C2-Dof
0.50At5g24930zinc finger (B-box type) family protein C2C2-CO-like
0.49At4g37180myb family transcription factor G2-like
0.49At1g03970G-box binding factor 4 (GBF4) ((GBF4)) bZIP
0.49At3g61890homeobox-leucine zipper protein 12 (HB-12) / HD-ZIP transcription factor 12 ((ATHB-12)) Homeobox
-0.48At3g16870zinc finger (GATA type) family protein C2C2-Gata
0.47At1g50600scarecrow-like transcription factor 5 (SCL5) GRAS
0.46At4g36900AP2 domain-containing protein RAP2.10 (RAP2.10) AP2-EREBP
-0.46At3g14740PHD finger family protein C2H2
0.45At5g49450bZIP family transcription factor bZIP
0.45At3g30210myb family transcription factor (MYB121) ((MYB121)) MYB

link to other 304 cis elements in ATTED

similar seq.
←CGTGTCA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGACACG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CGTGTCA1.000.0889
ACGTGTC0.970.1184
CACGTGT0.940.1292
ACACGTG0.930.1162
GACACGT0.890.0976
CACGTGG0.860.09112
ACGTGTA0.860.0682
CGTGGCA0.850.08110
TACACGT0.840.09112
CGTGTCC0.840.0882