cis; CGTGGCA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
    ACGTGGCA LRENPCABE [ref]
TGACACGTGGCA HY5AT [ref] [ref] [ref]
  RTACGTGGCR ABADESI1 [ref] [ref] [ref] [ref] [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CGTGGCA

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CGTGGCA.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.63At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.59At3g19290ABA-responsive element-binding protein 2 (AREB2) ((ABF4, AREB2)) bZIP
0.54At1g03970G-box binding factor 4 (GBF4) ((GBF4)) bZIP
0.53At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.52At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
-0.52At3g16870zinc finger (GATA type) family protein C2C2-Gata
0.51At2g46680homeobox-leucine zipper protein 7 (HB-7) / HD-ZIP transcription factor 7 ((ATHB-7)) Homeobox
0.50At1g77450no apical meristem (NAM) family protein NAC
-0.49At3g06740zinc finger (GATA type) family protein C2C2-Gata
0.49At3g02340zinc finger (C3HC4-type RING finger) family protein C3H
0.48At4g36900AP2 domain-containing protein RAP2.10 (RAP2.10) AP2-EREBP
0.48At4g01120G-box binding factor 2 (GBF2) ((GBF2)) bZIP
-0.47At3g14740PHD finger family protein C2H2
0.47At1g07530scarecrow-like transcription factor 14 (SCL14) GRAS
-0.47At1g27050homeobox-leucine zipper family protein Homeobox

link to other 304 cis elements in ATTED

similar seq.
CGTGGCA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGCCACG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CGTGGCA1.000.08110
ACGTGGC0.940.09104
CACGTGG0.910.09112
ACGTGTC0.860.1184
ACACGTG0.860.1162
CGTGTCA0.850.0889
GACACGT0.850.0976
ACGTGTA0.820.0682
CACGTGT0.820.1292
TACACGT0.820.09112