cis; ACGTGTA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
GACGTGTAAAGTAAATTTACAAC 23BPZM27KDAZEIN [ref]
 ACGTG                  ABRELATERD1 [ref]
 ACGT                   ACGTATERD1 [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ACGTGTA

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ACGTGTA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.68At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.64At5g67300myb family transcription factor MYB
0.63At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.61At4g33940zinc finger (C3HC4-type RING finger) family protein C3H
0.59At1g22190AP2 domain-containing transcription factor, putative AP2-EREBP
0.59At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.57At3g52800zinc finger (AN1-like) family protein C2H2
0.57At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC
0.57At3g15500no apical meristem (NAM) family protein (NAC3) ((ATNAC3)) NAC
0.56At1g50600scarecrow-like transcription factor 5 (SCL5) GRAS
0.56At2g46270G-box binding factor 3 (GBF3) ((GBF3)) bZIP
0.56At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
-0.56At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
0.55At1g69570Dof-type zinc finger domain-containing protein C2C2-Dof
0.54At1g77450no apical meristem (NAM) family protein NAC

link to other 304 cis elements in ATTED

similar seq.
ACGTGTA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TACACGT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ACGTGTA1.000.0682
TACACGT0.890.09112
ACGTGTC0.870.1184
CACGTGT0.870.1292
CGTGTCA0.860.0889
ACACGTG0.850.1162
AACACGT0.840.0794
CGTGGCA0.820.08110
CACGTGG0.820.09112
AGACACG0.820.07112