cis; AACGTGT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
             AACGTGT  QARBNEXTA [ref]
           GCAACGTGTC ABRE3HVA1 [ref] [ref]
GTACGTGTTATAAAACGTGT  WARBNEXTA [ref]
             AACGTG   T/GBOXATPIN2 [ref]
              ACGTG   ABRELATERD1 [ref]
              ACGT    ACGTATERD1 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AACGTGT

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AACGTGT.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.69At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.67At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.65At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.64At1g43160AP2 domain-containing protein RAP2.6 (RAP2.6) AP2-EREBP
0.63At1g77450no apical meristem (NAM) family protein NAC
0.63At3g52800zinc finger (AN1-like) family protein C2H2
0.62At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.62At5g67300myb family transcription factor MYB
0.61At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.60At4g05100myb family transcription factor (MYB74) MYB
0.60At2g38250DNA-binding protein-related Trihelix
0.60At1g08320bZIP family transcription factor bZIP
0.59At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.57At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.57At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC

link to other 304 cis elements in ATTED

similar seq.
←AACGTGT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ACACGTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AACGTGT1.000.0790
AACACGT0.850.0794
ACACGTT0.830.0633
CGTCACA0.830.07131
CGCGTCA0.780.07193
CACACGT0.760.0670
ACGCGTC0.740.0790
CACGTGT0.730.1292
ACGTGTA0.730.0682
CACGCGG0.730.0740