cis; CACACGT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
ACACACGTCAA ACGTSEED2 [ref]
    ACGT    ACGTATERD1 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CACACGT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CACACGT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.63At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.63At5g63790no apical meristem (NAM) family protein NAC
0.62At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.58At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.58At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.57At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.57At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.56At3g23250myb family transcription factor (MYB15) MYB
0.56At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.55At3g49530no apical meristem (NAM) family protein NAC
0.55At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.54At4g18170WRKY family transcription factor ((WRKY28)) WRKY
0.54At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.53At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.53At4g37790homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 ((HAT22)) Homeobox

link to other 304 cis elements in ATTED

similar seq.
←CACACGT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ACGTGTG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CACACGT1.000.0670
ACACGTT0.780.0633
ACGTGTA0.760.0682
AACGTGT0.760.0790
TACACGT0.740.09112
AACACGT0.730.0794
CGTCACA0.710.07131
ACTTCCT0.710.0696
ACGCGTC0.700.0790
ATAAATA0.690.0917