cis; AACACGT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
   ACGT ACGTATERD1 [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AACACGT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AACACGT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.76At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.70At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.69At1g77450no apical meristem (NAM) family protein NAC
0.68At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.66At2g46270G-box binding factor 3 (GBF3) ((GBF3)) bZIP
0.66At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC
0.64At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.62At4g05100myb family transcription factor (MYB74) MYB
0.61At3g52800zinc finger (AN1-like) family protein C2H2
0.61At5g67300myb family transcription factor MYB
0.60At3g61890homeobox-leucine zipper protein 12 (HB-12) / HD-ZIP transcription factor 12 ((ATHB-12)) Homeobox
0.59At1g43160AP2 domain-containing protein RAP2.6 (RAP2.6) AP2-EREBP
0.58At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.57At5g62020heat shock factor protein, putative (HSF6) / heat shock transcription factor, putative (HTSF6) ((AT-HSFB2A)) HSF
0.57At2g46680homeobox-leucine zipper protein 7 (HB-7) / HD-ZIP transcription factor 7 ((ATHB-7)) Homeobox

link to other 304 cis elements in ATTED

similar seq.
AACACGT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ACGTGTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AACACGT1.000.0794
AACGTGT0.850.0790
CACGTGT0.850.1292
ACGTGTC0.840.1184
AGACACG0.840.07112
ACGTGTA0.840.0682
TTACACG0.810.06113
TACGTGT0.810.0698
TACACGT0.810.09112
ACACGTG0.800.1162