cis; AGACACG


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AGACACG

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AGACACG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.62At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.58At1g77450no apical meristem (NAM) family protein NAC
0.56At5g12840CCAAT-binding transcription factor (CBF-B/NF-YA) family protein ((HAP2A)) CCAAT-HAP2
0.54At1g22985AP2 domain-containing transcription factor, putative AP2-EREBP
0.53At3g02990heat shock factor protein 2 (HSF2) / heat shock transcription factor 2 (HSTF2) ((ATHSFA1E)) HSF
0.52At1g52890no apical meristem (NAM) family protein NAC
0.52At2g46270G-box binding factor 3 (GBF3) ((GBF3)) bZIP
0.52At2g37150zinc finger (C3HC4-type RING finger) family protein C3H
0.51At3g62090basic helix-loop-helix (bHLH) protein, putative ((PIL2)) BHLH
0.51At4g36900AP2 domain-containing protein RAP2.10 (RAP2.10) AP2-EREBP
0.51At3g19290ABA-responsive element-binding protein 2 (AREB2) ((ABF4, AREB2)) bZIP
0.50At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC
0.50At1g43160AP2 domain-containing protein RAP2.6 (RAP2.6) AP2-EREBP
0.50At1g46768AP2 domain-containing protein RAP2.1 (RAP2.1) AP2-EREBP
0.50At2g46680homeobox-leucine zipper protein 7 (HB-7) / HD-ZIP transcription factor 7 ((ATHB-7)) Homeobox

link to other 304 cis elements in ATTED

similar seq.
AGACACG
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CGTGTCT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AGACACG1.000.07112
ACGTGTC0.880.1184
CACGTGT0.870.1292
ACACGTG0.840.1162
AACACGT0.840.0794
CGCCACG0.840.06129
CGTGTCC0.830.0882
TACGTGT0.830.0698
CGTGTCA0.820.0889
GACACGT0.820.0976