cis; AACGCGT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
AACGCGTGTC CE3OSOSEM [ref] [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AACGCGT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AACGCGT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.78At3g52800zinc finger (AN1-like) family protein C2H2
0.77At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.77At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.76At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.75At3g49530no apical meristem (NAM) family protein NAC
0.73At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.73At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.72At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.72At1g22510zinc finger (C3HC4-type RING finger) family protein C3H
0.72At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.72At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.71At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.71At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.71At5g67300myb family transcription factor MYB
0.69At2g23320WRKY family transcription factor ((WRKY15)) WRKY

link to other 304 cis elements in ATTED

similar seq.
AACGCGT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ACGCGTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AACGCGT1.000.10127
ACGCGTT0.950.1096
ACGCGTA0.940.1074
AAACGCG0.930.07149
CGCGTTT0.930.1193
ACGCGGT0.920.09141
CCGCGTT0.920.1017
AACCGCG0.910.0985
TAACGCG0.900.0762
ACCGCGT0.890.1098