cis; AACCGCG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AACCGCG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AACCGCG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.68At3g52800zinc finger (AN1-like) family protein C2H2
0.68At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.67At1g22510zinc finger (C3HC4-type RING finger) family protein C3H
0.66At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.65At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.65At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.64At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.64At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.64At3g49530no apical meristem (NAM) family protein NAC
0.62At3g50060myb family transcription factor MYB
0.61At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.61At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.60At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.60At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.60At4g17490ethylene-responsive element-binding protein, putative ((ATERF6, ERF-6-6)) AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←AACCGCG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CGCGGTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AACCGCG1.000.0985
ACCGCGT0.960.1098
CGCGTTT0.950.1193
ACGCGTT0.930.1096
CCGCGTT0.920.1017
AACGCGT0.910.10127
AAACGCG0.910.07149
ACGCGGT0.900.09141
GACGCGT0.890.0622
ACGCGTC0.890.0790