cis; GACGCGT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
GGACGCGTGGC ABADESI2 [ref] [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GACGCGT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GACGCGT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.73At3g49530no apical meristem (NAM) family protein NAC
0.72At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.70At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.70At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.69At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.69At3g52800zinc finger (AN1-like) family protein C2H2
0.68At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.68At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.66At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.66At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.65At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.65At1g42990bZIP transcription factor family protein bZIP
0.64At1g22510zinc finger (C3HC4-type RING finger) family protein C3H
0.64At4g17490ethylene-responsive element-binding protein, putative ((ATERF6, ERF-6-6)) AP2-EREBP
0.64At2g23320WRKY family transcription factor ((WRKY15)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←GACGCGT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ACGCGTC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GACGCGT1.000.0622
ACGCGTT0.910.1096
CGACGCG0.900.06101
CGCGTTT0.890.1193
ACCGCGT0.890.1098
ACGCGTA0.890.1074
AACCGCG0.890.0985
ACGCGGT0.890.09141
ACGCGTC0.890.0790
AACGCGT0.880.10127