[←][→] ath   At2g47900 Gene
functional annotation
Function   tubby like protein 3    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0071470 [list] [network] cellular response to osmotic stress  (53 genes)  IDA  
GO:0042542 [list] [network] response to hydrogen peroxide  (62 genes)  IEP  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IDA  
GO:0009620 [list] [network] response to fungus  (999 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  IDA  
GO:0009536 [list] [network] plastid  (5425 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001031558.1  NP_001189775.1  NP_850481.1 
BLAST NP_001031558.1  NP_001189775.1  NP_850481.1 
Orthologous [Ortholog page] LOC4332845 (osa)  LOC4344218 (osa)  LOC7497970 (ppo)  LOC11438329 (mtr)  LOC18101703 (ppo)  LOC25484782 (mtr)  LOC100778346 (gma)  LOC100809257 (gma)  LOC100815464 (gma)  LOC101259367 (sly)  LOC101265673 (sly)  LOC103843242 (bra)  LOC123085865 (tae)  LOC123092177 (tae)  LOC123097426 (tae)  LOC123448666 (hvu) 
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 2,  chlo_mito 2  (predict for NP_001031558.1)
chlo 5,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for NP_001189775.1)
chlo 4,  cyto 3,  nucl 2,  chlo_mito 2  (predict for NP_850481.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001031558.1)
other 7  (predict for NP_001189775.1)
other 7  (predict for NP_850481.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03015 mRNA surveillance pathway 2
Genes directly connected with TLP3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.3 DRB2 dsRNA-binding protein 2 [detail] 817386
7.3 SHH2 DNA-BINDING TRANSCRIPTION FACTOR 2 [detail] 821367
6.6 HUA1 floral homeotic protein (HUA1) [detail] 820448
5.4 PTB3 polypyrimidine tract-binding protein 3 [detail] 840918
Coexpressed
gene list		 [Coexpressed gene list for TLP3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266515_at
266515_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266515_at
266515_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266515_at
266515_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819402      
Refseq ID (protein) NP_001031558.1 
NP_001189775.1 
NP_850481.1 


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