[←][→] ath   AT4G00180 Gene
functional annotation
Function   Plant-specific transcription factor YABBY family protein  
GO BP
GO:0010158 [list] [network] abaxial cell fate specification  (8 genes)  IGI  
GO:1902183 [list] [network] regulation of shoot apical meristem development  (10 genes)  IMP  
GO:0009944 [list] [network] polarity specification of adaxial/abaxial axis  (23 genes)  IMP  
GO:2000024 [list] [network] regulation of leaf development  (73 genes)  IMP  
GO:0010154 [list] [network] fruit development  (753 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001078337.1  NP_567154.1 
BLAST NP_001078337.1  NP_567154.1 
Orthologous [Ortholog page] LOC103836941 (bra) 
Subcellular
localization
wolf
chlo 6,  nucl 3  (predict for NP_001078337.1)
nucl 10  (predict for NP_567154.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_001078337.1)
chlo 5,  other 4  (predict for NP_567154.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
Genes directly connected with YAB3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.4 AFO Plant-specific transcription factor YABBY family protein [detail] 819127
8.3 YAB5 plant-specific transcription factor YABBY family protein [detail] 817199
8.2 YAB2 Plant-specific transcription factor YABBY family protein [detail] 3766682
5.9 AT4G17810 C2H2 and C2HC zinc fingers superfamily protein [detail] 827503
5.0 AT3G61700 helicase with zinc finger protein [detail] 825343
Coexpressed
gene list		 [Coexpressed gene list for YAB3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255709_at
255709_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255709_at
255709_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255709_at
255709_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827914      
Refseq ID (protein) NP_001078337.1 
NP_567154.1 


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