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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   TAF5   TBP-associated factor 5 
 ath-u.5   TAF5   TBP-associated factor 5 
 ath-r.7   TAF5   TBP-associated factor 5 
 bra-r.6   103837080   transcription initiation factor TFIID subunit 5 
 bra-r.6   103854775   transcription initiation factor TFIID subunit 5 
 bna-r.1   106382625   transcription initiation factor TFIID subunit 5 
 bna-r.1   106404002   transcription initiation factor TFIID subunit 5-like 
 bna-r.1   106365904   transcription initiation factor TFIID subunit 5 
 ghi-r.1   121219257   transcription initiation factor TFIID subunit 5 
 ghi-r.1   107953742   transcription initiation factor TFIID subunit 5 
 ghi-r.1   107958992   transcription initiation factor TFIID subunit 5 
 cit-r.1   102624994   transcription initiation factor TFIID subunit 5 
 gma-u.5   100805953   transcription initiation factor TFIID subunit 5 
 gma-u.5   100790500   transcription initiation factor TFIID subunit 5 
 gma-u.5   100781563   transcription initiation factor TFIID subunit 5 
 vvi-u.5   100254222   transcription initiation factor TFIID subunit 5 
 ppo-u.5   7489149   transcription initiation factor TFIID subunit 5 
 ppo-u.5   7465413   transcription initiation factor TFIID subunit 5 
 mtr-u.5   11425826   transcription initiation factor TFIID subunit 5 
 sly-u.5   101268876   transcription initiation factor TFIID subunit 5 
 sot-r.1   102605539   transcription initiation factor TFIID subunit 5 
 nta-r.1   107830809   transcription initiation factor TFIID subunit 5 
 nta-r.1   107829673   transcription initiation factor TFIID subunit 5-like 
 osa-u.5   4342682   transcription initiation factor TFIID subunit 5 
 osa-u.5   4341679   transcription initiation factor TFIID subunit 5 
 zma-u.5   103642689   transcription initiation factor TFIID subunit 5 
 zma-u.5   103630828   transcription initiation factor TFIID subunit 5 
 zma-u.5   100274161   transcription initiation factor TFIID subunit 5 
 tae-r.2   123163720   transcription initiation factor TFIID subunit 5 
 tae-r.2   123104518   transcription initiation factor TFIID subunit 5 
 hvu-r.1   123413582   transcription initiation factor TFIID subunit 5 
 sbi-r.1   110431215   transcription initiation factor TFIID subunit 5 
 bdi-r.1   100837458   transcription initiation factor TFIID subunit 5 
 cre-r.1   CHLRE_12g526950v5   uncharacterized protein 

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Top 50 coexpressed genes to TAF5 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TAF5 (ath-e.2 coexpression data)

CoexMap"832586"


athTAF5 | Entrez gene ID : 832586      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 3 1 3 1 2 1 1 1 2 2 3 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001330252.1 [sequence] [blastp]
NP_197897.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  cysk 1,  chlo_mito 1  (predict for NP_001330252.1)
nucl 6,  chlo 2,  cyto 1,  mito 1,  cysk 1  (predict for NP_197897.3)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for NP_001330252.1)
other 8,  scret 3  (predict for NP_197897.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
TAF5
ath-u.5
for
TAF5
ath-r.7
for
TAF5
bra-r.6
for
103837080
bra-r.6
for
103854775
bna-r.1
for
106382625
bna-r.1
for
106404002
bna-r.1
for
106365904
ghi-r.1
for
121219257
ghi-r.1
for
107953742
ghi-r.1
for
107958992
cit-r.1
for
102624994
gma-u.5
for
100805953
gma-u.5
for
100790500
gma-u.5
for
100781563
vvi-u.5
for
100254222
ppo-u.5
for
7489149
ppo-u.5
for
7465413
mtr-u.5
for
11425826
sly-u.5
for
101268876
sot-r.1
for
102605539
nta-r.1
for
107830809
nta-r.1
for
107829673
osa-u.5
for
4342682
osa-u.5
for
4341679
zma-u.5
for
103642689
zma-u.5
for
103630828
zma-u.5
for
100274161
tae-r.2
for
123163720
tae-r.2
for
123104518
hvu-r.1
for
123413582
sbi-r.1
for
110431215
bdi-r.1
for
100837458
cre-r.1
for
CHLRE_12g526950v5


Ortholog ID: 5378
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma zma tae tae hvu sbi bdi cre
Symbol TAF5 LOC103837080 LOC103854775 LOC106382625 LOC106404002 LOC106365993 LOC121219257 LOC107953742 LOC107958992 LOC102624994 LOC100805953 LOC100790500 LOC100781563 LOC100254222 LOC7489149 LOC7465413 LOC11425826 LOC101268876 LOC102605539 LOC107830809 LOC107829673 LOC4342682 LOC4341679 LOC103642689 LOC103630828 LOC100501797 LOC123163720 LOC123104518 LOC123413582 LOC110431215 LOC100837458 CHLRE_12g526950v5
Function* TBP-associated factor 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5-like transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5-like transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 uncharacterized LOC100501797 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
ghi03022 Basal transcription factors 3
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
ghi03022 Basal transcription factors 3
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03022 Basal transcription factors 3
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03022 Basal transcription factors 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
ppo04136 Autophagy - other 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
mtr03083 Polycomb repressive complex 4
mtr03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03018 RNA degradation 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta03022 Basal transcription factors 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre03020 RNA polymerase 4
cre03420 Nucleotide excision repair 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832586 103837080 103854775 106382625 106404002 106365993 121219257 107953742 107958992 102624994 100805953 100790500 100781563 100254222 7489149 7465413 11425826 101268876 102605539 107830809 107829673 4342682 4341679 103642689 103630828 100501797 123163720 123104518 123413582 110431215 100837458 5722474
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