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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT5G66120   3-dehydroquinate synthase 
 ath-u.5   AT5G66120   3-dehydroquinate synthase 
 ath-r.7   AT5G66120   3-dehydroquinate synthase 
 ath-m.9   AT5G66120   3-dehydroquinate synthase 
 ath-m.4.bio   AT5G66120   3-dehydroquinate synthase 
 ath-m.4.hor   AT5G66120   3-dehydroquinate synthase 
 ath-m.4.lig   AT5G66120   3-dehydroquinate synthase 
 ath-m.4.str   AT5G66120   3-dehydroquinate synthase 
 ath-m.4.tis   AT5G66120   3-dehydroquinate synthase 
 bra-r.6   103837671   3-dehydroquinate synthase, chloroplastic 
 bna-r.1   106366334   3-dehydroquinate synthase, chloroplastic 
 bna-r.1   106392246   3-dehydroquinate synthase, chloroplastic 
 ghi-r.1   107945797   3-dehydroquinate synthase, chloroplastic 
 ghi-r.1   121211306   3-dehydroquinate synthase, chloroplastic 
 cit-r.1   102631297   3-dehydroquinate synthase, chloroplastic 
 gma-u.5   100812989   3-dehydroquinate synthase-like 
 gma-u.5   100806628   3-dehydroquinate synthase 
 vvi-u.5   100266137   3-dehydroquinate synthase-like 
 ppo-u.5   18099163   3-dehydroquinate synthase, chloroplastic 
 mtr-u.5   11420575   3-dehydroquinate synthase, chloroplastic 
 sly-u.5   DHQS   dehydroquinate synthase 
 sot-r.1   102598775   3-dehydroquinate synthase, chloroplastic 
 nta-r.1   107787846   3-dehydroquinate synthase, chloroplastic 
 nta-r.1   107768348   3-dehydroquinate synthase, chloroplastic 
 osa-u.5   4347717   3-dehydroquinate synthase, chloroplastic 
 zma-u.5   100283288   3-dehydroquinate synthase 
 zma-u.5   100272979   3-dehydroquinate synthase 
 tae-r.2   123112886   3-dehydroquinate synthase, chloroplastic 
 tae-r.2   123122392   3-dehydroquinate synthase, chloroplastic 
 tae-r.2   123104614   3-dehydroquinate synthase, chloroplastic 
 hvu-r.1   123400170   3-dehydroquinate synthase, chloroplastic 
 sbi-r.1   8063321   3-dehydroquinate synthase, chloroplastic 
 bdi-r.1   100834447   3-dehydroquinate synthase, chloroplastic 
 bdi-r.1   100834750   3-dehydroquinate synthase, chloroplastic 
 cre-r.1   CHLRE_08g368950v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G66120 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G66120 (ath-e.2 coexpression data)

CoexMap"836744"


athAT5G66120 | Entrez gene ID : 836744      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 2 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)
ath01230 [list] [network] Biosynthesis of amino acids (242 genes)
GO BP
GO CC
GO:0005802 [list] [network] trans-Golgi network  (279 genes)  HDA  
GO:0005768 [list] [network] endosome  (359 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_569029.1 [sequence] [blastp]
NP_851279.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_569029.1)
cyto 4,  chlo 3,  mito 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_851279.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_569029.1)
mito 6,  other 5  (predict for NP_851279.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT5G66120
ath-u.5
for
AT5G66120
ath-r.7
for
AT5G66120
ath-m.9
for
AT5G66120
ath-m.4.bio
for
AT5G66120
ath-m.4.hor
for
AT5G66120
ath-m.4.lig
for
AT5G66120
ath-m.4.str
for
AT5G66120
ath-m.4.tis
for
AT5G66120
bra-r.6
for
103837671
bna-r.1
for
106366334
bna-r.1
for
106392246
ghi-r.1
for
107945797
ghi-r.1
for
121211306
cit-r.1
for
102631297
gma-u.5
for
100812989
gma-u.5
for
100806628
vvi-u.5
for
100266137
ppo-u.5
for
18099163
mtr-u.5
for
11420575
sly-u.5
for
DHQS
sot-r.1
for
102598775
nta-r.1
for
107787846
nta-r.1
for
107768348
osa-u.5
for
4347717
zma-u.5
for
100283288
zma-u.5
for
100272979
tae-r.2
for
123112886
tae-r.2
for
123122392
tae-r.2
for
123104614
hvu-r.1
for
123400170
sbi-r.1
for
8063321
bdi-r.1
for
100834447
bdi-r.1
for
100834750
cre-r.1
for
CHLRE_08g368950v5


Ortholog ID: 9196
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi bdi cre
Symbol AT5G66120 LOC103837671 LOC106366334 LOC106392246 LOC107945797 LOC121211306 LOC102631297 LOC100812989 LOC100806628 LOC100266137 LOC18099163 LOC11420575 DHQS LOC102598775 LOC107787846 LOC107768348 LOC4347717 LOC100283288 LOC100272979 LOC123112886 LOC123122392 LOC123104614 LOC123400170 LOC8063321 LOC100834447 LOC100834750 CHLRE_08g368950v5
Function* 3-dehydroquinate synthase 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase-like 3-dehydroquinate synthase 3-dehydroquinate synthase-like 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic dehydroquinate synthase 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase 3-dehydroquinate synthase 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic 3-dehydroquinate synthase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 9
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
ath00030 Pentose phosphate pathway 4
ath01200 Carbon metabolism 3
ath00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 14
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 11
bra00999 Biosynthesis of various plant secondary metabolites 3
bra00350 Tyrosine metabolism 2
bra00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 11
bna01230 Biosynthesis of amino acids 11
bna00010 Glycolysis / Gluconeogenesis 2
bna00071 Fatty acid degradation 2
bna00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 11
bna01230 Biosynthesis of amino acids 11
bna00010 Glycolysis / Gluconeogenesis 2
bna00071 Fatty acid degradation 2
bna00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
ghi01230 Biosynthesis of amino acids 8
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
ghi01230 Biosynthesis of amino acids 8
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 3
cit00510 N-Glycan biosynthesis 2
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
gma01230 Biosynthesis of amino acids 9
gma00020 Citrate cycle (TCA cycle) 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
gma01230 Biosynthesis of amino acids 8
gma01200 Carbon metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
vvi01230 Biosynthesis of amino acids 7
vvi00020 Citrate cycle (TCA cycle) 3
vvi00350 Tyrosine metabolism 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 6
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
ppo01200 Carbon metabolism 2
ppo00071 Fatty acid degradation 2
ppo00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 8
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
mtr00350 Tyrosine metabolism 4
mtr01200 Carbon metabolism 4
mtr00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 10
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
sly01200 Carbon metabolism 5
sly00030 Pentose phosphate pathway 2
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 9
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
sot01200 Carbon metabolism 4
sot00020 Citrate cycle (TCA cycle) 2
sot00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 6
nta00941 Flavonoid biosynthesis 6
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 6
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
nta01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 6
nta00941 Flavonoid biosynthesis 6
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 6
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
nta01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 9
osa01200 Carbon metabolism 6
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
osa00710 Carbon fixation by Calvin cycle 4
osa00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 10
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
zma01200 Carbon metabolism 5
zma00350 Tyrosine metabolism 3
zma00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 11
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
zma01200 Carbon metabolism 5
zma00350 Tyrosine metabolism 4
zma00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 13
tae01230 Biosynthesis of amino acids 13
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00790 Folate biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 11
tae01230 Biosynthesis of amino acids 11
tae00270 Cysteine and methionine metabolism 3
tae00350 Tyrosine metabolism 3
tae00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 12
tae01230 Biosynthesis of amino acids 12
tae00270 Cysteine and methionine metabolism 2
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
hvu01230 Biosynthesis of amino acids 4
hvu00480 Glutathione metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 9
sbi00360 Phenylalanine metabolism 8
sbi01230 Biosynthesis of amino acids 8
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
sbi00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 12
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
bdi01200 Carbon metabolism 5
bdi00030 Pentose phosphate pathway 4
bdi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 11
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
bdi01200 Carbon metabolism 5
bdi00030 Pentose phosphate pathway 4
bdi00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 7
cre03272 Virion - Hepatitis viruses 5
cre03250 Viral life cycle - HIV-1 4
cre04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836744 103837671 106366334 106392246 107945797 121211306 102631297 100812989 100806628 100266137 18099163 11420575 544273 102598775 107787846 107768348 4347717 100283288 100272979 123112886 123122392 123104614 123400170 8063321 100834447 100834750 5721715
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