Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT1G13410   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT1G13410   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-r.7   AT1G13410   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   AT1G13410   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   AT1G13410   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT1G13410   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   AT1G13410   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   AT1G13410   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   AT1G13410   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103836103   pentatricopeptide repeat-containing protein At4g02750 
 ghi-r.1   107906451   pentatricopeptide repeat-containing protein At3g29230 
 ghi-r.1   121229338   pentatricopeptide repeat-containing protein At3g29230 
 cit-r.1   102619843   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 gma-u.5   100818133   pentatricopeptide repeat-containing protein At3g29230 
 vvi-u.5   100257772   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ppo-u.5   7488362   pentatricopeptide repeat-containing protein At3g29230 
 mtr-u.5   25501384   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 sly-u.5   101246348   pentatricopeptide repeat-containing protein 
 sot-r.1   102602917   pentatricopeptide repeat-containing protein At3g29230 
 nta-r.1   107828262   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 nta-r.1   107829133   pentatricopeptide repeat-containing protein At2g20540 

close


Top 50 coexpressed genes to AT1G13410 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G13410 (ath-e.2 coexpression data)

CoexMap"837901"


athAT1G13410 | Entrez gene ID : 837901      
Species ath bra ghi cit gma vvi ppo mtr sly sot nta cre hvu bna tae bdi osa zma sbi
Paralog 9 1 2 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_172798.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 2,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for NP_172798.2)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for NP_172798.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT1G13410
ath-u.5
for
AT1G13410
ath-r.7
for
AT1G13410
ath-m.9
for
AT1G13410
ath-m.4.bio
for
AT1G13410
ath-m.4.hor
for
AT1G13410
ath-m.4.lig
for
AT1G13410
ath-m.4.str
for
AT1G13410
ath-m.4.tis
for
AT1G13410
bra-r.6
for
103836103
ghi-r.1
for
107906451
ghi-r.1
for
121229338
cit-r.1
for
102619843
gma-u.5
for
100818133
vvi-u.5
for
100257772
ppo-u.5
for
7488362
mtr-u.5
for
25501384
sly-u.5
for
101246348
sot-r.1
for
102602917
nta-r.1
for
107828262
nta-r.1
for
107829133


Ortholog ID: 14059
Species ath bra ghi ghi cit gma vvi ppo mtr sly sot nta nta
Symbol AT1G13410 LOC103836103 LOC107906451 LOC121229338 LOC102619843 LOC100818133 LOC100257772 LOC7488362 LOC25501384 LOC101246348 LOC102602917 LOC107828262 LOC107829133
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At2g20540
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00480 Glutathione metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837901 103836103 107906451 121229338 102619843 100818133 100257772 7488362 25501384 101246348 102602917 107828262 107829133
The preparation time of this page was 0.1 [sec].