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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RPS5A   ribosomal protein 5A 
 ath-r.7   RPS5A   ribosomal protein 5A 
 ath-e.2   RPS5A   ribosomal protein 5A 
 ath-u.5   RPS5B   ribosomal protein 5B 
 bra-r.6   103857673   40S ribosomal protein S5-1 
 bra-r.6   103859418   40S ribosomal protein S5-1 
 bra-r.6   103865585   40S ribosomal protein S5-1 
 bna-r.1   111215106   40S ribosomal protein S5-1 
 bna-r.1   106452508   40S ribosomal protein S5-1-like 
 bna-r.1   106448908   40S ribosomal protein S5-1 
 ghi-r.1   107889468   40S ribosomal protein S5 
 ghi-r.1   107921204   40S ribosomal protein S5 
 ghi-r.1   107919507   40S ribosomal protein S5 
 cit-r.1   102622374   40S ribosomal protein S5 
 cit-r.1   102616307   40S ribosomal protein S5 
 cit-r.1   102625543   40S ribosomal protein S5-like 
 gma-u.5   100815850   40S ribosomal protein S5-like 
 gma-u.5   100803239   40S ribosomal protein S5 
 gma-u.5   100499758   uncharacterized LOC100499758 
 vvi-u.5   100243591   small ribosomal subunit protein uS7 
 vvi-u.5   100232926   small ribosomal subunit protein uS7 
 ppo-u.5   7488051   40S ribosomal protein S5 
 ppo-u.5   7479501   40S ribosomal protein S5 
 mtr-u.5   25499566   40S ribosomal protein S5 
 mtr-u.5   25483546   40S ribosomal protein S5 
 sly-u.5   101266690   small ribosomal subunit protein uS7 
 sly-u.5   101248251   small ribosomal subunit protein uS7 
 sot-r.1   102606169   40S ribosomal protein S5-like 
 sot-r.1   102597496   40S ribosomal protein S5 
 nta-r.1   107815336   small ribosomal subunit protein uS7 
 nta-r.1   107812924   small ribosomal subunit protein uS7 
 nta-r.1   107812918   small ribosomal subunit protein uS7-like 
 osa-u.5   4326457   small ribosomal subunit protein uS7 
 osa-u.5   4350516   small ribosomal subunit protein uS7 
 zma-u.5   100193240   40S ribosomal protein S5 
 zma-u.5   100193556   40S ribosomal protein S5-like 
 tae-r.2   123077234   40S ribosomal protein S5 
 tae-r.2   123060232   40S ribosomal protein S5 
 tae-r.2   123068729   40S ribosomal protein S5 
 hvu-r.1   123442764   40S ribosomal protein S5 
 sbi-r.1   110433540   40S ribosomal protein S5 
 bdi-r.1   100833689   40S ribosomal protein S5 
 bdi-r.1   100821763   40S ribosomal protein S5 
 cre-r.1   CHLRE_06g290950v5   uncharacterized protein 

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Top 50 coexpressed genes to RPS5A (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RPS5A (ath-u.5 coexpression data)

CoexMap"820367"


athRPS5A | Entrez gene ID : 820367      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 2 2 2 2 2 3 2 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  HDA  
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  HDA IDA  
Protein NP_187800.1 [sequence] [blastp]
NP_850564.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 9,  chlo 1,  cyto 1  (predict for NP_187800.1)
cysk 9,  chlo 1,  cyto 1  (predict for NP_850564.1)
Subcellular
localization
TargetP
other 8  (predict for NP_187800.1)
other 8  (predict for NP_850564.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RPS5A
ath-r.7
for
RPS5A
ath-e.2
for
RPS5A
ath-u.5
for
RPS5B
bra-r.6
for
103857673
bra-r.6
for
103859418
bra-r.6
for
103865585
bna-r.1
for
111215106
bna-r.1
for
106452508
bna-r.1
for
106448908
ghi-r.1
for
107889468
ghi-r.1
for
107921204
ghi-r.1
for
107919507
cit-r.1
for
102622374
cit-r.1
for
102616307
cit-r.1
for
102625543
gma-u.5
for
100815850
gma-u.5
for
100803239
gma-u.5
for
100499758
vvi-u.5
for
100243591
vvi-u.5
for
100232926
ppo-u.5
for
7488051
ppo-u.5
for
7479501
mtr-u.5
for
25499566
mtr-u.5
for
25483546
sly-u.5
for
101266690
sly-u.5
for
101248251
sot-r.1
for
102606169
sot-r.1
for
102597496
nta-r.1
for
107815336
nta-r.1
for
107812924
nta-r.1
for
107812918
osa-u.5
for
4326457
osa-u.5
for
4350516
zma-u.5
for
100193240
zma-u.5
for
100193556
tae-r.2
for
123077234
tae-r.2
for
123060232
tae-r.2
for
123068729
hvu-r.1
for
123442764
sbi-r.1
for
110433540
bdi-r.1
for
100833689
bdi-r.1
for
100821763
cre-r.1
for
CHLRE_06g290950v5


Ortholog ID: 2137
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi bdi cre
Symbol RPS5A RPS5B LOC103857673 LOC103845892 LOC103870297 LOC111215106 LOC106448908 LOC106351362 LOC107921204 LOC107891217 LOC121220911 LOC102622374 LOC102616307 LOC102625543 LOC100815850 LOC100803239 LOC100499758 LOC100243591 LOC100232926 LOC7488051 LOC7479501 LOC25499566 LOC25483546 LOC101266690 LOC101248251 LOC102606169 LOC102597496 LOC107812924 LOC107812918 LOC107802477 LOC4326457 LOC4350516 LOC100193240 LOC100193556 LOC123077234 LOC123060232 LOC123068729 LOC123442764 LOC110433540 LOC100833689 LOC100821763 CHLRE_06g290950v5
Function* ribosomal protein 5A ribosomal protein 5B 40S ribosomal protein S5-1 40S ribosomal protein S5-1 40S ribosomal protein S5-1 40S ribosomal protein S5-1 40S ribosomal protein S5-1 40S ribosomal protein S5-1-like 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5-like 40S ribosomal protein S5-like 40S ribosomal protein S5 uncharacterized LOC100499758 small ribosomal subunit protein uS7 small ribosomal subunit protein uS7 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 small ribosomal subunit protein uS7 small ribosomal subunit protein uS7 40S ribosomal protein S5-like 40S ribosomal protein S5 small ribosomal subunit protein uS7 small ribosomal subunit protein uS7-like small ribosomal subunit protein uS7 small ribosomal subunit protein uS7 small ribosomal subunit protein uS7 40S ribosomal protein S5 40S ribosomal protein S5-like 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
nta03040 Spliceosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820367 818304 103857673 103845892 103870297 111215106 106448908 106351362 107921204 107891217 121220911 102622374 102616307 102625543 100815850 100803239 100499758 100243591 100232926 7488051 7479501 25499566 25483546 101266690 101248251 102606169 102597496 107812924 107812918 107802477 4326457 4350516 100193240 100193556 123077234 123060232 123068729 123442764 110433540 100833689 100821763 5721089
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