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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RPL23AB   ribosomal protein L23AB 
 ath-r.7   RPL23AB   ribosomal protein L23AB 
 ath-m.9   RPL23AB   ribosomal protein L23AB 
 ath-e.2   RPL23AB   ribosomal protein L23AB 
 ath-m.4.bio   RPL23AB   ribosomal protein L23AB 
 ath-m.4.hor   RPL23AB   ribosomal protein L23AB 
 ath-m.4.lig   RPL23AB   ribosomal protein L23AB 
 ath-m.4.str   RPL23AB   ribosomal protein L23AB 
 ath-m.4.tis   RPL23AB   ribosomal protein L23AB 
 ath-u.5   RPL23AA   ribosomal protein L23AA 
 bra-r.6   103867038   60S ribosomal protein L23a-1 
 bra-r.6   103857868   60S ribosomal protein L23a-1 
 bra-r.6   103865723   60S ribosomal protein L23a-1 
 bna-r.1   106411675   60S ribosomal protein L23a-2 
 bna-r.1   106420754   60S ribosomal protein L23a-1 
 bna-r.1   106367522   60S ribosomal protein L23a-2 
 ghi-r.1   107897793   60S ribosomal protein L23a 
 ghi-r.1   107906169   60S ribosomal protein L23A 
 ghi-r.1   107930746   60S ribosomal protein L23a 
 cit-r.1   102620310   60S ribosomal protein L23A 
 cit-r.1   102630069   60S ribosomal protein L23a 
 gma-u.5   100500043   uncharacterized LOC100500043 
 gma-u.5   100777933   60S ribosomal protein L23a 
 gma-u.5   100527754   uncharacterized LOC100527754 
 vvi-u.5   100262091   60S ribosomal protein L23A-like 
 vvi-u.5   100254719   large ribosomal subunit protein uL23 
 vvi-u.5   100246504   large ribosomal subunit protein uL23 
 ppo-u.5   7489596   60S ribosomal protein L23a 
 ppo-u.5   7489278   60S ribosomal protein L23a 
 ppo-u.5   7469814   60S ribosomal protein L23a 
 mtr-u.5   11415929   60S ribosomal protein L23a 
 mtr-u.5   25497704   60S ribosomal protein L23a-2 
 mtr-u.5   11413266   60S ribosomal protein L23a-2 
 sly-u.5   101247574   large ribosomal subunit protein uL23-like 
 sly-u.5   101258423   large ribosomal subunit protein uL23-like 
 sly-u.5   101246658   large ribosomal subunit protein uL23 
 sot-r.1   102578219   60S ribosomal protein L23a-like 
 sot-r.1   102600627   60S ribosomal protein L23a-like 
 nta-r.1   107763824   large ribosomal subunit protein uL23-like 
 nta-r.1   107828734   large ribosomal subunit protein uL23-like 
 nta-r.1   107821921   large ribosomal subunit protein uL23-like 
 osa-u.5   4326469   large ribosomal subunit protein uL23 
 osa-u.5   4336307   60S ribosomal protein L23A 
 zma-u.5   100280771   60S ribosomal protein L23a 
 zma-u.5   100283914   60S ribosomal protein L23a 
 zma-u.5   103635211   uncharacterized LOC103635211 
 tae-r.2   123189664   60S ribosomal protein L23A 
 tae-r.2   123045935   60S ribosomal protein L23A 
 tae-r.2   123053802   60S ribosomal protein L23A 
 hvu-r.1   123427148   60S ribosomal protein L23A 
 sbi-r.1   110436529   60S ribosomal protein L23a-like 
 sbi-r.1   110431282   60S ribosomal protein L23A-like 
 bdi-r.1   100840552   60S ribosomal protein L23A 
 bdi-r.1   100823942   60S ribosomal protein L23A 
 cre-r.1   CHLRE_06g282500v5   ribosomal protein L23a 

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Top 50 coexpressed genes to RPL23AB (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RPL23AB (ath-u.5 coexpression data)

CoexMap"824694"


athRPL23AB | Entrez gene ID : 824694      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 2 3 3 3 3 3 2 3 2 3 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0009644 [list] [network] response to high light intensity  (71 genes)  IEP  
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  IEP  
GO:0009409 [list] [network] response to cold  (436 genes)  IEP  
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  RCA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA RCA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_001078293.1 [sequence] [blastp]
NP_001078294.1 [sequence] [blastp]
NP_191088.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_001078293.1)
nucl 5,  cyto 4  (predict for NP_001078294.1)
nucl 6,  cyto 4  (predict for NP_191088.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_001078293.1)
other 6,  chlo 4  (predict for NP_001078294.1)
other 7,  chlo 5  (predict for NP_191088.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RPL23AB
ath-r.7
for
RPL23AB
ath-m.9
for
RPL23AB
ath-e.2
for
RPL23AB
ath-m.4.bio
for
RPL23AB
ath-m.4.hor
for
RPL23AB
ath-m.4.lig
for
RPL23AB
ath-m.4.str
for
RPL23AB
ath-m.4.tis
for
RPL23AB
ath-u.5
for
RPL23AA
bra-r.6
for
103867038
bra-r.6
for
103857868
bra-r.6
for
103865723
bna-r.1
for
106411675
bna-r.1
for
106420754
bna-r.1
for
106367522
ghi-r.1
for
107897793
ghi-r.1
for
107906169
ghi-r.1
for
107930746
cit-r.1
for
102620310
cit-r.1
for
102630069
gma-u.5
for
100500043
gma-u.5
for
100777933
gma-u.5
for
100527754
vvi-u.5
for
100262091
vvi-u.5
for
100254719
vvi-u.5
for
100246504
ppo-u.5
for
7489596
ppo-u.5
for
7489278
ppo-u.5
for
7469814
mtr-u.5
for
11415929
mtr-u.5
for
25497704
mtr-u.5
for
11413266
sly-u.5
for
101247574
sly-u.5
for
101258423
sly-u.5
for
101246658
sot-r.1
for
102578219
sot-r.1
for
102600627
nta-r.1
for
107763824
nta-r.1
for
107828734
nta-r.1
for
107821921
osa-u.5
for
4326469
osa-u.5
for
4336307
zma-u.5
for
100280771
zma-u.5
for
100283914
zma-u.5
for
103635211
tae-r.2
for
123189664
tae-r.2
for
123045935
tae-r.2
for
123053802
hvu-r.1
for
123427148
sbi-r.1
for
110436529
sbi-r.1
for
110431282
bdi-r.1
for
100840552
bdi-r.1
for
100823942
cre-r.1
for
CHLRE_06g282500v5


Ortholog ID: 1495
Species ath ath bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol RPL23AB RPL23AA LOC103865723 LOC106420754 LOC106367522 LOC106395928 LOC107963930 LOC107959083 LOC107932494 LOC102620310 LOC102630069 LOC100500043 LOC100779362 LOC100778548 LOC100262091 LOC100254719 LOC100246504 LOC7489596 LOC7491944 LOC7465270 LOC11415929 LOC25497704 LOC11413266 LOC101247574 LOC101258423 LOC101246658 LOC102578219 LOC102600627 LOC107821921 LOC107796789 LOC107771404 LOC4326469 LOC4336307 LOC100280771 LOC100283914 LOC103635211 LOC123189664 LOC123045935 LOC123053802 LOC123427148 LOC110436529 LOC110431282 LOC100840552 LOC100823942 CHLRE_06g282500v5
Function* ribosomal protein L23AB ribosomal protein L23AA 60S ribosomal protein L23a-1 60S ribosomal protein L23a-1 60S ribosomal protein L23a-2 60S ribosomal protein L23a-1 60S ribosomal protein L23A 60S ribosomal protein L23A 60S ribosomal protein L23A 60S ribosomal protein L23A 60S ribosomal protein L23a uncharacterized LOC100500043 60S ribosomal protein L23A 60S ribosomal protein L23a-like 60S ribosomal protein L23A-like large ribosomal subunit protein uL23 large ribosomal subunit protein uL23 60S ribosomal protein L23a 60S ribosomal protein L23a 60S ribosomal protein L23a 60S ribosomal protein L23a 60S ribosomal protein L23a-2 60S ribosomal protein L23a-2 large ribosomal subunit protein uL23-like large ribosomal subunit protein uL23-like large ribosomal subunit protein uL23 60S ribosomal protein L23a-like 60S ribosomal protein L23a-like large ribosomal subunit protein uL23-like 60S ribosomal protein L23a large ribosomal subunit protein uL23-like large ribosomal subunit protein uL23 60S ribosomal protein L23A 60S ribosomal protein L23a 60S ribosomal protein L23a uncharacterized LOC103635211 60S ribosomal protein L23A 60S ribosomal protein L23A 60S ribosomal protein L23A 60S ribosomal protein L23A 60S ribosomal protein L23a-like 60S ribosomal protein L23A-like 60S ribosomal protein L23A 60S ribosomal protein L23A ribosomal protein L23a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824694 818531 103865723 106420754 106367522 106395928 107963930 107959083 107932494 102620310 102630069 100500043 100779362 100778548 100262091 100254719 100246504 7489596 7491944 7465270 11415929 25497704 11413266 101247574 101258423 101246658 102578219 102600627 107821921 107796789 107771404 4326469 4336307 100280771 100283914 103635211 123189664 123045935 123053802 123427148 110436529 110431282 100840552 100823942 5720945
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