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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   DRB4   double-stranded-RNA-binding protein 4 
 ath-r.7   DRB4   double-stranded-RNA-binding protein 4 
 ath-m.9   DRB4   double-stranded-RNA-binding protein 4 
 ath-e.2   DRB4   double-stranded-RNA-binding protein 4 
 ath-m.4.bio   DRB4   double-stranded-RNA-binding protein 4 
 ath-m.4.hor   DRB4   double-stranded-RNA-binding protein 4 
 ath-m.4.lig   DRB4   double-stranded-RNA-binding protein 4 
 ath-m.4.str   DRB4   double-stranded-RNA-binding protein 4 
 ath-m.4.tis   DRB4   double-stranded-RNA-binding protein 4 
 bra-r.6   103842082   double-stranded RNA-binding protein 4 
 bna-r.1   106420272   double-stranded RNA-binding protein 4-like 
 bna-r.1   106415757   double-stranded RNA-binding protein 4 
 ghi-r.1   107903851   double-stranded RNA-binding protein 1 
 ghi-r.1   107893770   double-stranded RNA-binding protein 1 
 cit-r.1   102630955   double-stranded RNA-binding protein 4-like 
 gma-u.5   100306453   double-stranded RNA binding motif-containing protein 
 vvi-u.5   100243264   double-stranded RNA-binding protein 3 
 ppo-u.5   18108247   double-stranded RNA-binding protein 1 
 ppo-u.5   112325693   double-stranded RNA-binding protein 1 
 sly-u.5   101261264   double-stranded RNA-binding protein 4 
 sot-r.1   102590508   double-stranded RNA-binding protein 1-like 
 nta-r.1   107827437   double-stranded RNA-binding protein 1 
 nta-r.1   107768358   double-stranded RNA-binding protein 1 
 nta-r.1   142176332   uncharacterized LOC142176332 
 osa-u.5   4324620   double-stranded RNA-binding protein 1-like 
 zma-u.5   100383324   uncharacterized LOC100383324 

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Top 50 coexpressed genes to DRB4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to DRB4 (ath-u.5 coexpression data)

CoexMap"825455"


athDRB4 | Entrez gene ID : 825455      
Species ath bra bna ghi cit gma vvi ppo sly sot nta osa zma sbi mtr tae hvu cre bdi
Paralog 9 1 2 2 1 1 1 2 1 1 3 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009616 [list] [network] RNAi-mediated antiviral immune response  (13 genes)  IMP  
GO:0010267 [list] [network] ta-siRNA processing  (15 genes)  IMP  
GO:0035196 [list] [network] miRNA processing  (30 genes)  IMP  
GO:0051607 [list] [network] defense response to virus  (55 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003725 [list] [network] double-stranded RNA binding  (14 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001154686.1 [sequence] [blastp]
NP_191839.2 [sequence] [blastp]
NP_974480.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 2  (predict for NP_001154686.1)
nucl 8,  mito 1  (predict for NP_191839.2)
nucl 8,  mito 1  (predict for NP_974480.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for NP_001154686.1)
other 5,  mito 3  (predict for NP_191839.2)
other 5,  mito 3  (predict for NP_974480.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
DRB4
ath-r.7
for
DRB4
ath-m.9
for
DRB4
ath-e.2
for
DRB4
ath-m.4.bio
for
DRB4
ath-m.4.hor
for
DRB4
ath-m.4.lig
for
DRB4
ath-m.4.str
for
DRB4
ath-m.4.tis
for
DRB4
bra-r.6
for
103842082
bna-r.1
for
106420272
bna-r.1
for
106415757
ghi-r.1
for
107903851
ghi-r.1
for
107893770
cit-r.1
for
102630955
gma-u.5
for
100306453
vvi-u.5
for
100243264
ppo-u.5
for
18108247
ppo-u.5
for
112325693
sly-u.5
for
101261264
sot-r.1
for
102590508
nta-r.1
for
107827437
nta-r.1
for
107768358
nta-r.1
for
142176332
osa-u.5
for
4324620
zma-u.5
for
100383324


Ortholog ID: 6913
Species ath bra bna bna ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta nta osa zma
Symbol DRB4 LOC103842082 LOC106420272 LOC106415757 LOC107903851 LOC107893770 LOC102630955 LOC100306453 LOC100243264 LOC18108247 LOC112325693 LOC25495853 LOC101261264 LOC102590508 LOC107827437 LOC107768358 LOC142176332 LOC4324620 LOC100383324
Function* double-stranded-RNA-binding protein 4 double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 4-like double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 4-like double-stranded RNA binding motif-containing protein double-stranded RNA-binding protein 3 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 1-like double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 uncharacterized LOC142176332 double-stranded RNA-binding protein 1-like uncharacterized LOC100383324
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03083 Polycomb repressive complex 2
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma03020 RNA polymerase 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03015 mRNA surveillance pathway 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825455 103842082 106420272 106415757 107903851 107893770 102630955 100306453 100243264 18108247 112325693 25495853 101261264 102590508 107827437 107768358 142176332 4324620 100383324
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