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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   LDOX   leucoanthocyanidin dioxygenase 
 ath-r.7   LDOX   leucoanthocyanidin dioxygenase 
 ath-e.2   LDOX   leucoanthocyanidin dioxygenase 
 gma-u.5   ANS2   anthocyanidin synthase 
 gma-u.5   ANS3   leucoanthocyanidin dioxygenase 
 vvi-u.5   LDOX   leucoanthocyanidin dioxygenase 
 ppo-u.5   7490928   leucoanthocyanidin dioxygenase 
 ppo-u.5   7465826   leucoanthocyanidin dioxygenase 
 mtr-u.5   11436267   leucoanthocyanidin dioxygenase 
 sly-u.5   ANS   anthocyanidin synthase 
 zma-u.5   100127010   anthocyaninless 2 

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Top 50 coexpressed genes to LDOX (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LDOX (ath-u.5 coexpression data)

CoexMap"828387"


athLDOX | Entrez gene ID : 828387      
Species ath gma vvi ppo mtr sly zma sot hvu tae cit sbi ghi cre bna nta bdi bra osa
Paralog 3 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00941 [list] [network] Flavonoid biosynthesis (25 genes)
GO BP
GO:0010023 [list] [network] proanthocyanidin biosynthetic process  (6 genes)  IMP  
GO:0009718 [list] [network] anthocyanin-containing compound biosynthetic process  (18 genes)  TAS  
GO:0007033 [list] [network] vacuole organization  (45 genes)  IMP  
GO:0009753 [list] [network] response to jasmonic acid  (202 genes)  IEP  
GO:0009611 [list] [network] response to wounding  (271 genes)  IEP  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0050589 [list] [network] leucocyanidin oxygenase activity  (1 genes)  ISS  
Protein NP_001031700.1 [sequence] [blastp]
NP_001320035.1 [sequence] [blastp]
NP_194019.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cysk 3,  chlo 1,  cysk_nucl 1,  cysk_plas 1  (predict for NP_001031700.1)
cyto 5,  cysk 3,  chlo 1,  cysk_nucl 1,  cysk_plas 1  (predict for NP_001320035.1)
cyto 5,  cysk 3,  chlo 1,  cysk_nucl 1,  cysk_plas 1  (predict for NP_194019.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001031700.1)
other 6  (predict for NP_001320035.1)
other 6  (predict for NP_194019.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
LDOX

.
ath-r.7
for
LDOX

.
ath-e.2
for
LDOX

.
gma-u.5
for
ANS2

.
gma-u.5
for
ANS3

.
vvi-u.5
for
LDOX

.
ppo-u.5
for
7490928

.
ppo-u.5
for
7465826

.
mtr-u.5
for
11436267

.
sly-u.5
for
ANS

.
zma-u.5
for
100127010

.


Ortholog ID: 7673
Species ath gma gma sly zma bra bra vvi ppo ppo mtr tae ghi ghi bna bna sot cit nta
Symbol LDOX ANS2 ANS3 ANS LOC100127010 LOC103861341 LOC103860424 LDOX LOC7465826 LOC7490928 LOC11436267 LOC123140655 LOC107936429 LOC107926986 LOC106440474 LOC106375745 ANS LOC102577958 ANS2
Function* leucoanthocyanidin dioxygenase anthocyanidin synthase leucoanthocyanidin dioxygenase anthocyanidin synthase anthocyaninless 2 leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase 2 leucoanthocyanidin dioxygenase anthocyanin synthase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase anthocyanidin synthase anthocyanidin synthase leucoanthocyanidin dioxygenase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 5
ath04712 Circadian rhythm - plant 2
ath00942 Anthocyanin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 4
sly00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 7
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00942 Anthocyanin biosynthesis 3
bra00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00942 Anthocyanin biosynthesis 3
bra00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 8
vvi04712 Circadian rhythm - plant 3
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 13
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 13
ghi04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 16
ghi04712 Circadian rhythm - plant 8
ghi00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 8
sot00944 Flavone and flavonol biosynthesis 2
sot04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828387 547615 100801148 101251607 100127010 103861341 103860424 100233142 7465826 7490928 11436267 123140655 107936429 107926986 106440474 106375745 102598323 102577958 107778118
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