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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   LDOX   leucoanthocyanidin dioxygenase 
 ath-r.7   LDOX   leucoanthocyanidin dioxygenase 
 ath-e.2   LDOX   leucoanthocyanidin dioxygenase 
 gma-u.5   ANS2   anthocyanidin synthase 
 gma-u.5   ANS3   leucoanthocyanidin dioxygenase 
 vvi-u.5   LDOX   leucoanthocyanidin dioxygenase 
 ppo-u.5   7490928   leucoanthocyanidin dioxygenase 
 ppo-u.5   7465826   leucoanthocyanidin dioxygenase 
 mtr-u.5   11436267   leucoanthocyanidin dioxygenase 
 sly-u.5   ANS   anthocyanidin synthase 
 zma-u.5   100127010   anthocyaninless 2 

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Top 50 coexpressed genes to LDOX (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LDOX (ath-u.5 coexpression data)

CoexMap"828387"


athLDOX | Entrez gene ID : 828387      
Species ath gma vvi ppo mtr sly zma bdi hvu bra cit bna sbi ghi osa sot nta cre tae
Paralog 3 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00941 [list] [network] Flavonoid biosynthesis (25 genes)
GO BP
GO:0010023 [list] [network] proanthocyanidin biosynthetic process  (6 genes)  IMP  
GO:0009718 [list] [network] anthocyanin-containing compound biosynthetic process  (18 genes)  TAS  
GO:0007033 [list] [network] vacuole organization  (45 genes)  IMP  
GO:0009753 [list] [network] response to jasmonic acid  (202 genes)  IEP  
GO:0009611 [list] [network] response to wounding  (271 genes)  IEP  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0050589 [list] [network] leucocyanidin oxygenase activity  (1 genes)  ISS  
Protein NP_001031700.1 [sequence] [blastp]
NP_001320035.1 [sequence] [blastp]
NP_194019.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cysk 3,  chlo 1,  cysk_nucl 1,  cysk_plas 1  (predict for NP_001031700.1)
cyto 5,  cysk 3,  chlo 1,  cysk_nucl 1,  cysk_plas 1  (predict for NP_001320035.1)
cyto 5,  cysk 3,  chlo 1,  cysk_nucl 1,  cysk_plas 1  (predict for NP_194019.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001031700.1)
other 6  (predict for NP_001320035.1)
other 6  (predict for NP_194019.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
LDOX
ath-r.7
for
LDOX
ath-e.2
for
LDOX
gma-u.5
for
ANS2
gma-u.5
for
ANS3
vvi-u.5
for
LDOX
ppo-u.5
for
7490928
ppo-u.5
for
7465826
mtr-u.5
for
11436267
sly-u.5
for
ANS
zma-u.5
for
100127010


Ortholog ID: 7673
Species ath bra bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta zma tae
Symbol LDOX LOC103861341 LOC103860424 LOC106440474 LOC106375745 LOC107936429 LOC107926986 LOC102577958 ANS2 ANS3 LDOX LOC7465826 LOC7490928 LOC11436267 ANS ANS ANS2 LOC100127010 LOC123140655
Function* leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase anthocyanin synthase anthocyanidin synthase anthocyanidin synthase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase leucoanthocyanidin dioxygenase anthocyanidin synthase anthocyanidin synthase leucoanthocyanidin dioxygenase-like anthocyaninless 2 leucoanthocyanidin dioxygenase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 5
ath04712 Circadian rhythm - plant 2
ath00942 Anthocyanin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00942 Anthocyanin biosynthesis 3
bra00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00942 Anthocyanin biosynthesis 3
bra00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 13
ghi04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 16
ghi04712 Circadian rhythm - plant 8
ghi00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 8
vvi04712 Circadian rhythm - plant 3
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 13
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 4
sly00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 8
sot00944 Flavone and flavonol biosynthesis 2
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 7
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828387 103861341 103860424 106440474 106375745 107936429 107926986 102577958 547615 100801148 100233142 7465826 7490928 11436267 101251607 102598323 107778118 100127010 123140655
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