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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G48470   uncharacterized protein 
 ath-r.7   AT5G48470   uncharacterized protein 
 ath-m.9   AT5G48470   uncharacterized protein 
 ath-e.2   AT5G48470   uncharacterized protein 
 ath-m.4.bio   AT5G48470   uncharacterized protein 
 ath-m.4.hor   AT5G48470   uncharacterized protein 
 ath-m.4.lig   AT5G48470   uncharacterized protein 
 ath-m.4.str   AT5G48470   uncharacterized protein 
 ath-m.4.tis   AT5G48470   uncharacterized protein 
 bra-r.6   103837255   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 bna-r.1   BNAC09G02460D   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 bna-r.1   106365809   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like 
 ghi-r.1   107954656   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 ghi-r.1   107952752   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 cit-r.1   102624744   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 gma-u.5   100795042   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 gma-u.5   100799171   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 vvi-u.5   100265443   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 ppo-u.5   7471187   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 mtr-u.5   11438261   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 sly-u.5   101257209   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 sot-r.1   102594523   uncharacterized LOC102594523 
 nta-r.1   107813996   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 nta-r.1   107811735   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like 
 osa-u.5   4350378   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like 
 zma-u.5   100276194   uncharacterized LOC100276194 
 tae-r.2   123102356   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 tae-r.2   123119540   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 tae-r.2   123110514   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 hvu-r.1   123398246   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 sbi-r.1   8057060   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 bdi-r.1   100828331   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 cre-r.1   CHLRE_09g393800v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G48470 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G48470 (ath-u.5 coexpression data)

CoexMap"834902"


athAT5G48470 | Entrez gene ID : 834902      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IMP  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (48 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_568697.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_568697.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_568697.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G48470
ath-r.7
for
AT5G48470
ath-m.9
for
AT5G48470
ath-e.2
for
AT5G48470
ath-m.4.bio
for
AT5G48470
ath-m.4.hor
for
AT5G48470
ath-m.4.lig
for
AT5G48470
ath-m.4.str
for
AT5G48470
ath-m.4.tis
for
AT5G48470
bra-r.6
for
103837255
bna-r.1
for
BNAC09G02460D
bna-r.1
for
106365809
ghi-r.1
for
107954656
ghi-r.1
for
107952752
cit-r.1
for
102624744
gma-u.5
for
100795042
gma-u.5
for
100799171
vvi-u.5
for
100265443
ppo-u.5
for
7471187
mtr-u.5
for
11438261
sly-u.5
for
101257209
sot-r.1
for
102594523
nta-r.1
for
107813996
nta-r.1
for
107811735
osa-u.5
for
4350378
zma-u.5
for
100276194
tae-r.2
for
123102356
tae-r.2
for
123119540
tae-r.2
for
123110514
hvu-r.1
for
123398246
sbi-r.1
for
8057060
bdi-r.1
for
100828331
cre-r.1
for
CHLRE_09g393800v5


Ortholog ID: 8645
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G48470 LOC103837255 BNAC09G02460D LOC106365809 LOC107954656 LOC107952752 LOC102624744 LOC100795042 LOC100799171 LOC100265443 LOC7471187 LOC11438261 LOC101257209 LOC102594523 LOC107813996 LOC107811735 LOC4350378 LOC100276194 LOC123102356 LOC123119540 LOC123110514 LOC123398246 LOC8057060 LOC100828331 CHLRE_09g393800v5
Function* uncharacterized protein protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic uncharacterized LOC102594523 protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like uncharacterized LOC100276194 protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834902 103837255 106428092 106365809 107954656 107952752 102624744 100795042 100799171 100265443 7471187 11438261 101257209 102594523 107813996 107811735 4350378 100276194 123102356 123119540 123110514 123398246 8057060 100828331 5720123
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