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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101257209   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 sly-r.6   101257209   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 sly-m.5   101257209   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 ath-u.5   AT5G48470   uncharacterized protein 
 gma-u.5   100799171   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 gma-u.5   100795042   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 vvi-u.5   100265443   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 ppo-u.5   7471187   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 mtr-u.5   11438261   protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 osa-u.5   4350378   protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like 
 zma-u.5   100276194   uncharacterized LOC100276194 

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Top 50 coexpressed genes to 101257209 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101257209 (sly-u.5 coexpression data)

CoexMap"101257209"


slyLOC101257209 | Entrez gene ID : 101257209      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (8 genes)  IEA  
GO MF
Protein XP_004247029.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_004247029.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_004247029.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101257209

.
sly-r.6
for
101257209

.
sly-m.5
for
101257209

.
ath-u.5
for
AT5G48470

.
gma-u.5
for
100799171

.
gma-u.5
for
100795042

.
vvi-u.5
for
100265443

.
ppo-u.5
for
7471187

.
mtr-u.5
for
11438261

.
osa-u.5
for
4350378

.
zma-u.5
for
100276194

.


Ortholog ID: 8645
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol AT5G48470 LOC100795042 LOC100799171 LOC101257209 LOC4350378 LOC100276194 LOC103837255 LOC100265443 LOC7471187 LOC11438261 LOC123110514 LOC123102356 LOC123398246 LOC107952752 LOC107954656 LOC106365809 CHLRE_09g393800v5 LOC8057060 LOC102594523 LOC102624744 LOC100828331 LOC107813996 LOC107811735
Function* uncharacterized protein protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like uncharacterized LOC100276194 protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like uncharacterized protein protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic uncharacterized LOC102594523 protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834902 100795042 100799171 101257209 4350378 100276194 103837255 100265443 7471187 11438261 123110514 123102356 123398246 107952752 107954656 106365809 5720123 8057060 102594523 102624744 100828331 107813996 107811735
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