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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106365809  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like 
 bna-r.1  BNAC09G02460D  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 bra-r.6  103837255  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 ath-u.5  AT5G48470  uncharacterized protein 
 ghi-r.1  107954656  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 ghi-r.1  107952752  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 cit-r.1  102624744  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 gma-u.5  100799171  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 gma-u.5  100795042  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 vvi-u.5  100265443  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 ppo-u.5  7471187  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 mtr-u.5  11438261  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 sly-u.5  101257209  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 sot-r.1  102594523  uncharacterized LOC102594523 
 nta-r.1  107811735  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like 
 nta-r.1  107813996  protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic 
 osa-u.5  4350378  protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like 
 zma-u.5  100276194  uncharacterized LOC100276194 
 tae-r.2  123102356  protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 tae-r.2  123119540  protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 tae-r.2  123110514  protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 hvu-r.1  123398246  protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 sbi-r.1  8057060  protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 bdi-r.1  100828331  protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic 
 cre-r.1  CHLRE_09g393800v5  uncharacterized protein 

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Top 50 coexpressed genes to 106365809 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106365809 (bna-r.1 coexpression data)

CoexMap"106365809"


bnaLOC106365809 | Entrez gene ID : 106365809
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (19 genes)  IEA  
GO MF
Protein XP_048595290.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 2,  cyto_mito 2  (predict for XP_048595290.1)
Subcellular
localization
TargetP
chlo 7,  mito 5  (predict for XP_048595290.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106365809


bna-r.1
for
BNAC09G02460D


bra-r.6
for
103837255


ath-u.5
for
AT5G48470


ghi-r.1
for
107954656


ghi-r.1
for
107952752


cit-r.1
for
102624744


gma-u.5
for
100799171


gma-u.5
for
100795042


vvi-u.5
for
100265443


ppo-u.5
for
7471187


mtr-u.5
for
11438261


sly-u.5
for
101257209


sot-r.1
for
102594523


nta-r.1
for
107811735


nta-r.1
for
107813996


osa-u.5
for
4350378


zma-u.5
for
100276194


tae-r.2
for
123102356


tae-r.2
for
123119540


tae-r.2
for
123110514


hvu-r.1
for
123398246


sbi-r.1
for
8057060


bdi-r.1
for
100828331


cre-r.1
for
CHLRE_09g393800v5



Ortholog ID: 8645
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106365809 BNAC09G02460D LOC103837255 AT5G48470 LOC107954656 LOC107952752 LOC102624744 LOC100799171 LOC100795042 LOC100265443 LOC7471187 LOC11438261 LOC101257209 LOC102594523 LOC107811735 LOC107813996 LOC4350378 LOC100276194 LOC123102356 LOC123119540 LOC123110514 LOC123398246 LOC8057060 LOC100828331 CHLRE_09g393800v5
Function* protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic uncharacterized protein protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic uncharacterized LOC102594523 protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic-like protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like uncharacterized LOC100276194 protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106365809 106428092 103837255 834902 107954656 107952752 102624744 100799171 100795042 100265443 7471187 11438261 101257209 102594523 107811735 107813996 4350378 100276194 123102356 123119540 123110514 123398246 8057060 100828331 5720123
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