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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G62760   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-r.7   AT5G62760   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.9   AT5G62760   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-e.2   AT5G62760   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.bio   AT5G62760   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.hor   AT5G62760   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.lig   AT5G62760   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.str   AT5G62760   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.tis   AT5G62760   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 bra-r.6   103874715   YLP motif-containing protein 1 
 bna-r.1   106347851   YLP motif-containing protein 1-like 
 bna-r.1   106424904   uncharacterized LOC106424904 
 ghi-r.1   107946497   uncharacterized LOC107946497 
 cit-r.1   102629941   uncharacterized LOC102629941 
 gma-u.5   100804293   uncharacterized LOC100804293 
 gma-u.5   100775851   protein PAF1 homolog 
 vvi-u.5   100265726   uncharacterized LOC100265726 
 ppo-u.5   18105814   uncharacterized LOC18105814 
 mtr-u.5   11445374   YLP motif-containing protein 1 
 sly-u.5   101256497   uncharacterized LOC101256497 
 sot-r.1   102590443   uncharacterized LOC102590443 
 nta-r.1   107775130   uncharacterized LOC107775130 
 nta-r.1   107794033   uncharacterized LOC107794033 
 osa-u.5   4328718   uncharacterized LOC4328718 
 zma-u.5   100276773   uncharacterized LOC100276773 
 tae-r.2   123136956   uncharacterized LOC123136956 
 tae-r.2   123127308   uncharacterized LOC123127308 
 tae-r.2   123144376   uncharacterized LOC123144376 
 hvu-r.1   123403840   uncharacterized LOC123403840 
 sbi-r.1   8082951   uncharacterized LOC8082951 
 bdi-r.1   100838487   uncharacterized LOC100838487 
 cre-r.1   CHLRE_14g629400v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G62760 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G62760 (ath-u.5 coexpression data)

CoexMap"836397"


athAT5G62760 | Entrez gene ID : 836397      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 1 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_001190598.1 [sequence] [blastp]
NP_001190599.1 [sequence] [blastp]
NP_001332400.1 [sequence] [blastp]
NP_001332401.1 [sequence] [blastp]
NP_568961.3 [sequence] [blastp]
NP_851250.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for NP_001190598.1)
nucl 7,  chlo 3  (predict for NP_001190599.1)
nucl 8,  chlo 2  (predict for NP_001332400.1)
nucl 8,  chlo 2  (predict for NP_001332401.1)
nucl 7,  chlo 3  (predict for NP_568961.3)
nucl 6,  chlo 4  (predict for NP_851250.1)
Subcellular
localization
TargetP
other 4,  mito 4  (predict for NP_001190598.1)
other 4,  mito 4  (predict for NP_001190599.1)
other 4,  mito 4  (predict for NP_001332400.1)
other 4,  mito 4  (predict for NP_001332401.1)
other 4,  mito 4  (predict for NP_568961.3)
other 4,  mito 4  (predict for NP_851250.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G62760
ath-r.7
for
AT5G62760
ath-m.9
for
AT5G62760
ath-e.2
for
AT5G62760
ath-m.4.bio
for
AT5G62760
ath-m.4.hor
for
AT5G62760
ath-m.4.lig
for
AT5G62760
ath-m.4.str
for
AT5G62760
ath-m.4.tis
for
AT5G62760
bra-r.6
for
103874715
bna-r.1
for
106347851
bna-r.1
for
106424904
ghi-r.1
for
107946497
cit-r.1
for
102629941
gma-u.5
for
100804293
gma-u.5
for
100775851
vvi-u.5
for
100265726
ppo-u.5
for
18105814
mtr-u.5
for
11445374
sly-u.5
for
101256497
sot-r.1
for
102590443
nta-r.1
for
107775130
nta-r.1
for
107794033
osa-u.5
for
4328718
zma-u.5
for
100276773
tae-r.2
for
123136956
tae-r.2
for
123127308
tae-r.2
for
123144376
hvu-r.1
for
123403840
sbi-r.1
for
8082951
bdi-r.1
for
100838487
cre-r.1
for
CHLRE_14g629400v5


Ortholog ID: 11012
Species ath bra bna bna ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G62760 LOC103874715 LOC106347851 LOC106424904 LOC107946497 LOC102629941 LOC100804293 LOC100775851 LOC100265726 LOC18105814 LOC11445374 LOC101256497 LOC102590443 LOC107775130 LOC107794033 LOC4328718 LOC100276773 LOC123136956 LOC123127308 LOC123144376 LOC123403840 LOC8082951 LOC100838487 CHLRE_14g629400v5
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein YLP motif-containing protein 1 YLP motif-containing protein 1-like uncharacterized LOC106424904 uncharacterized LOC107946497 uncharacterized LOC102629941 uncharacterized LOC100804293 protein PAF1 homolog uncharacterized LOC100265726 uncharacterized LOC18105814 YLP motif-containing protein 1 uncharacterized LOC101256497 uncharacterized LOC102590443 uncharacterized LOC107775130 uncharacterized LOC107794033 uncharacterized LOC4328718 uncharacterized LOC100276773 uncharacterized LOC123136956 uncharacterized LOC123127308 uncharacterized LOC123144376 uncharacterized LOC123403840 uncharacterized LOC8082951 uncharacterized LOC100838487 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03013 Nucleocytoplasmic transport 3
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03040 Spliceosome 5
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836397 103874715 106347851 106424904 107946497 102629941 100804293 100775851 100265726 18105814 11445374 101256497 102590443 107775130 107794033 4328718 100276773 123136956 123127308 123144376 123403840 8082951 100838487 66056312
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