Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103831110   polyadenylation and cleavage factor homolog 1 
 bna-r.1   106348573   polyadenylation and cleavage factor homolog 5-like 
 bna-r.1   106353885   polyadenylation and cleavage factor homolog 1-like 
 ath-u.5   AT5G43620   Pre-mRNA cleavage complex II 
 ath-u.5   AT1G66500   Pre-mRNA cleavage complex II 
 ppo-u.5   7491724   uncharacterized LOC7491724 
 ppo-u.5   18106822   polyadenylation and cleavage factor homolog 1 

close


Top 50 coexpressed genes to 103831110 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 103831110 (bra-r.6 coexpression data)

CoexMap"103831110"


braLOC103831110 | Entrez gene ID : 103831110    
Species bra bna ath ppo sbi osa gma sot sly cit mtr tae hvu vvi ghi zma cre nta bdi
Paralog 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03015 [list] [network] mRNA surveillance pathway (205 genes)
GO BP
GO:0006369 [list] [network] termination of RNA polymerase II transcription  (7 genes)  IEA  
GO CC
GO:0005849 [list] [network] mRNA cleavage factor complex  (23 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0000993 [list] [network] RNA polymerase II complex binding  (20 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (432 genes)  IEA  
Protein XP_009105211.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for XP_009105211.1)
Subcellular
localization
TargetP
other 4  (predict for XP_009105211.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103831110
bna-r.1
for
106348573
bna-r.1
for
106353885
ath-u.5
for
AT5G43620
ath-u.5
for
AT1G66500
ppo-u.5
for
7491724
ppo-u.5
for
18106822


Ortholog ID: 18188
Species bra bna bna ath ath ppo ppo
Symbol LOC103831110 LOC106348573 LOC106353885 AT5G43620 AT1G66500 LOC7491724 LOC18106822
Function* polyadenylation and cleavage factor homolog 1 polyadenylation and cleavage factor homolog 5-like polyadenylation and cleavage factor homolog 1-like Pre-mRNA cleavage complex II Pre-mRNA cleavage complex II uncharacterized LOC7491724 polyadenylation and cleavage factor homolog 1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04626 Plant-pathogen interaction 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103831110 106348573 106353885 834382 842968 7491724 18106822
The preparation time of this page was 0.2 [sec].