Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G66500   Pre-mRNA cleavage complex II 
 ath-r.7   AT1G66500   Pre-mRNA cleavage complex II 
 ath-e.2   AT1G66500   Pre-mRNA cleavage complex II 
 ath-u.5   AT5G43620   Pre-mRNA cleavage complex II 
 ppo-u.5   7491724   uncharacterized LOC7491724 
 ppo-u.5   18106822   polyadenylation and cleavage factor homolog 1 

close


Top 50 coexpressed genes to AT1G66500 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G66500 (ath-u.5 coexpression data)

CoexMap"842968"


athAT1G66500 | Entrez gene ID : 842968      
Species ath ppo nta bna gma tae sot bdi hvu cit vvi cre sly ghi osa bra sbi zma mtr
Paralog 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03015 [list] [network] mRNA surveillance pathway (119 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_176823.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for NP_176823.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for NP_176823.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G66500

.
ath-r.7
for
AT1G66500

.
ath-e.2
for
AT1G66500

.
ath-u.5
for
AT5G43620

.
ppo-u.5
for
7491724

.
ppo-u.5
for
18106822

.


Ortholog ID: 18188
Species ath ath bra ppo ppo bna bna
Symbol AT5G43620 AT1G66500 LOC103831110 LOC7491724 LOC18106822 LOC106348573 LOC106353885
Function* Pre-mRNA cleavage complex II Pre-mRNA cleavage complex II polyadenylation and cleavage factor homolog 1 uncharacterized LOC7491724 polyadenylation and cleavage factor homolog 1 polyadenylation and cleavage factor homolog 5-like polyadenylation and cleavage factor homolog 1-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04626 Plant-pathogen interaction 2
bna03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834382 842968 103831110 7491724 18106822 106348573 106353885
The preparation time of this page was 1.3 [sec].