KEGG 03015 mRNA surveillance pathway

119  ath genes in this database.

List of genes in ath


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
815840 O, Y ABH1 ARM repeat superfamily protein
816867 C, N PAB4 poly(A) binding protein 4
817127 O, N PAPS2 poly(A) polymerase 2
817470 O, N AT2G29210 splicing factor PWI domain-containing protein
817489 O, Y TOPP1 type one protein phosphatase 1
817905 O, N AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein
818222 C, N AT2G36480 pre-mRNA cleavage complex 2 Pcf11-like protein
818238 C, C PAB7 poly(A) binding protein 7
818511 O, N AT2G39260 regulator of nonsense transcripts UPF2
818571 O, Y TOPP4 type one serine/threonine protein phosphatase 4
818850 O, Y PP2A-3 protein phosphatase 2A-3
819172 M, C SAP18 SIN3 associated polypeptide P18
819626 C, C CLPS3 CLP-similar protein 3
819724 O, Y TOPP9 Calcineurin-like metallo-phosphoesterase superfamily protein
819835 O, Y PAPS3 poly(A) polymerase 3
819972 O, N AT3G07810 RNA-binding (RRM/RBD/RNP motifs) family protein
820064 O, N AT3G09100 mRNA capping enzyme family protein
820146 C, M ATB' BETA Protein phosphatase 2A regulatory B subunit family protein
820885 O, N PAB6 poly(A) binding protein 6
821513 O, Y EIF4A-III eukaryotic initiation factor 4A-III
821612 C, C AT3G20650 mRNA capping enzyme family protein
821719 C, N AT3G21650 Protein phosphatase 2A regulatory B subunit family protein
822171 O, C PP2AA2 protein phosphatase 2A subunit A2
822199 C, Y AT3G26020 Protein phosphatase 2A regulatory B subunit family protein
822200 O, Y ATB' DELTA serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
822273 O, Y ERF1-3 eukaryotic release factor 1-3
823835 O, Y TOPP5 type one serine/threonine protein phosphatase 5
824379 C, C PSRP2 RNA-binding (RRM/RBD/RNP motifs) family protein
824386 O, N AT3G52210 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
824477 O, Y LOS4 P-loop containing nucleoside triphosphate hydrolases superfamily protein
824658 C, Y AT3G54930 Protein phosphatase 2A regulatory B subunit family protein
825008 O, Y AT3G58390 Eukaryotic release factor 1 (eRF1) family protein
825019 O, Y PP2A-4 protein phosphatase 2A-4
825827 C, N PCFS4 PCF11P-similar protein 4
826726 O, Y TOPP7 Calcineurin-like metallo-phosphoesterase superfamily protein
827071 O, N AT4G14300 RNA-binding (RRM/RBD/RNP motifs) family protein
827211 C, M ATB' GAMMA Protein phosphatase 2A regulatory B subunit family protein
828660 O, Y AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit
828772 O, N AT4G26650 RNA-binding (RRM/RBD/RNP motifs) family protein
828876 O, C PEL1 Eukaryotic release factor 1 (eRF1) family protein
829104 O, Y CFIM-25 homolog of CFIM-25
829421 O, N nPAP nuclear poly(a) polymerase
829557 O, N PAB2 poly(A) binding protein 2
829850 O, N AT4G36960 RNA-binding (RRM/RBD/RNP motifs) family protein
830123 O, N AT4G39680 SAP domain-containing protein
830899 S, N AT5G10350 RNA-binding (RRM/RBD/RNP motifs) family protein
830928 O, N AT5G10630 Translation elongation factor EF1A/initiation factor IF2gamma family protein
830986 O, Y UAP56a DEAD/DEAH box RNA helicase family protein
830990 O, C UAP56b DEAD/DEAH box RNA helicase family protein
831191 O, N FY Transducin/WD40 repeat-like superfamily protein
831240 O, N AT5G01290 mRNA capping enzyme family protein
831304 O, Y AT5G14530 Transducin/WD40 repeat-like superfamily protein
831597 O, N ESP4 HEAT repeat-containing protein
831828 O, N ATB' ALPHA Protein phosphatase 2A regulatory B subunit family protein
831923 O, M AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein
831962 M, N NUFIP GATA zinc finger protein
831976 C, N FASS tonneau 2 (TON2)
832060 O, C SMG7 Telomerase activating protein Est1
832453 O, Y CPSF100 cleavage and polyadenylation specificity factor 100
832626 C, M AT5G25510 Protein phosphatase 2A regulatory B subunit family protein
832846 O, Y TOPP8 Calcineurin-like metallo-phosphoesterase superfamily protein
832897 O, Y AT5G28210 mRNA capping enzyme family protein
833004 O, N AT5G28850 Calcium-binding EF-hand family protein
833013 O, N AT5G28900 Calcium-binding EF-hand family protein
833750 C, N ALY4 ALWAYS EARLY 4
833990 M, N CLPS5 CLP1-similar protein 5
834356 O, C TOPP6 type one serine/threonine protein phosphatase 6
834382 O, N AT5G43620 Pre-mRNA cleavage complex II
834432 S, C AT5G44090 Calcium-binding EF-hand family protein
834443 M, N CBP20 CAP-binding protein 20
834747 O, N LBA1 RNA helicase
834812 O, N AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein
834839 O, Y ERF1-1 eukaryotic release factor 1-1
835186 O, N PABN1 polyadenylate-binding protein 1
835240 O, Y CPSF160 cleavage and polyadenylation specificity factor 160
835649 O, N AT5G55550 RNA-binding (RRM/RBD/RNP motifs) family protein
835661 O, N AT5G55670 RNA-binding (RRM/RBD/RNP motifs) family protein
835960 O, N TAF15b TBP-associated factor 15B
836034 O, Y TOPP2 type one serine/threonine protein phosphatase 2
836117 C, N AT5G59950 RNA-binding (RRM/RBD/RNP motifs) family protein
836215 O, K AT5G60940 Transducin/WD40 repeat-like superfamily protein
836651 O, N AT5G65260 RNA-binding (RRM/RBD/RNP motifs) family protein
836756 O, Y AT5G66240 Transducin/WD40 repeat-like superfamily protein
837560 O, Y MAGO mago nashi family protein
837583 O, Y PP2A-2 protein phosphatase 2A-2
837682 O, N PYM partner of Y14-MAGO
837850 O, Y ERF1-2 eukaryotic release factor 1-2
837869 O, Y GLE1 nucleoporin GLE1-like protein
837877 O, N AT1G13190 RNA-binding (RRM/RBD/RNP motifs) family protein
837892 O, C PP2AA3 protein phosphatase 2A subunit A3
837906 C, Y AT1G13460 Protein phosphatase 2A regulatory B subunit family protein
838086 O, N AT1G15200 protein-protein interaction regulator family protein
838230 C, N SR45 arginine/serine-rich 45
838348 O, K ATB BETA Protein phosphatase 2A, regulatory subunit PR55
838354 O, Y CSTF77 Tetratricopeptide repeat (TPR)-like superfamily protein
838378 O, N PAPS1 poly(A) polymerase 1
838387 O, K AT1G18070 Translation elongation factor EF1A/initiation factor IF2gamma family protein
838882 O, N PAB3 poly(A) binding protein 3
839135 O, C RCN1 ARM repeat superfamily protein
839361 O, Y AT1G03960 Calcium-binding EF hand family protein
839651 S, C AT1G27595 symplekin
839925 O, N CPSF30 cleavage and polyadenylation specificity factor 30
840295 O, N UPF3 Smg-4/UPF3 family protein
840313 O, N PAB1 poly(A) binding protein 1
841399 S, X PAB8 poly(A) binding protein 8
841562 O, Y AT1G51380 DEA(D/H)-box RNA helicase family protein
841576 O, N Y14 RNA-binding (RRM/RBD/RNP motifs) family protein
841594 S, C B ALPHA protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
841887 O, N AT1G54450 Calcium-binding EF-hand family protein
842216 O, C RBP1 RNA-binding protein 1
842276 O, Y PP2A-1 protein phosphatase 2A-2
842393 O, C CPSF73-I cleavage and polyadenylation specificity factor 73-I
842708 O, Y TOPP3 type one serine/threonine protein phosphatase 3
842943 O, N AT1G66260 RNA-binding (RRM/RBD/RNP motifs) family protein
842968 M, N AT1G66500 Pre-mRNA cleavage complex II
843333 O, Y PP2A serine/threonine protein phosphatase 2A
843507 O, X PAB5 poly(A)-binding protein 5
843510 O, C CSTF64 cleavage stimulating factor 64
843718 C, C AT1G73820 Ssu72-like family protein


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