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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G29210   splicing factor PWI domain-containing protein 
 ath-r.7   AT2G29210   splicing factor PWI domain-containing protein 
 ath-m.9   AT2G29210   splicing factor PWI domain-containing protein 
 ath-e.2   AT2G29210   splicing factor PWI domain-containing protein 
 ath-m.4.bio   AT2G29210   splicing factor PWI domain-containing protein 
 ath-m.4.hor   AT2G29210   splicing factor PWI domain-containing protein 
 ath-m.4.lig   AT2G29210   splicing factor PWI domain-containing protein 
 ath-m.4.str   AT2G29210   splicing factor PWI domain-containing protein 
 ath-m.4.tis   AT2G29210   splicing factor PWI domain-containing protein 
 bra-r.6   103868054   serine/arginine repetitive matrix protein 1 
 bna-r.1   125609450   serine/arginine repetitive matrix protein 1-like 
 bna-r.1   106436179   serine/arginine repetitive matrix protein 1 
 bna-r.1   106405802   serine/arginine repetitive matrix protein 1 
 ghi-r.1   107942448   serine/arginine repetitive matrix protein 1 
 ghi-r.1   107934350   serine/arginine repetitive matrix protein 1 
 cit-r.1   102608178   uncharacterized LOC102608178 
 gma-u.5   100810238   serine/arginine repetitive matrix protein 1 
 gma-u.5   100790051   serine/arginine repetitive matrix protein 1 
 vvi-u.5   100246732   uncharacterized LOC100246732 
 ppo-u.5   7485685   uncharacterized LOC7485685 
 ppo-u.5   7468613   uncharacterized LOC7468613 
 mtr-u.5   11427645   serine/arginine repetitive matrix protein 1 
 sly-u.5   101263053   uncharacterized LOC101263053 
 sot-r.1   102596503   serine/arginine repetitive matrix protein 1 
 nta-r.1   107818409   uncharacterized LOC107818409 
 nta-r.1   107787198   uncharacterized LOC107787198 
 osa-u.5   4332383   uncharacterized LOC4332383 
 zma-u.5   100304415   splicing factor PWI domain-containing protein 
 tae-r.2   123085420   serine/arginine repetitive matrix protein 1 
 tae-r.2   123092620   serine/arginine repetitive matrix protein 1 
 tae-r.2   123097929   serine/arginine repetitive matrix protein 1 
 hvu-r.1   123449038   serine/arginine repetitive matrix protein 1 
 sbi-r.1   110436881   serine/arginine repetitive matrix protein 1 
 bdi-r.1   100836380   serine/arginine repetitive matrix protein 1 
 cre-r.1   CHLRE_16g678050v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G29210 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G29210 (ath-u.5 coexpression data)

CoexMap"817470"


athAT2G29210 | Entrez gene ID : 817470      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03013 [list] [network] Nucleocytoplasmic transport (105 genes)
ath03015 [list] [network] mRNA surveillance pathway (119 genes)
GO BP
GO:1902074 [list] [network] response to salt  (50 genes)  IEP  
GO:0008380 [list] [network] RNA splicing  (195 genes)  NAS  
GO CC
GO:0016607 [list] [network] nuclear speck  (52 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1764 genes)  IDA IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001324350.1 [sequence] [blastp]
NP_180484.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001324350.1)
nucl 10  (predict for NP_180484.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001324350.1)
other 6  (predict for NP_180484.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G29210
ath-r.7
for
AT2G29210
ath-m.9
for
AT2G29210
ath-e.2
for
AT2G29210
ath-m.4.bio
for
AT2G29210
ath-m.4.hor
for
AT2G29210
ath-m.4.lig
for
AT2G29210
ath-m.4.str
for
AT2G29210
ath-m.4.tis
for
AT2G29210
bra-r.6
for
103868054
bna-r.1
for
125609450
bna-r.1
for
106436179
bna-r.1
for
106405802
ghi-r.1
for
107942448
ghi-r.1
for
107934350
cit-r.1
for
102608178
gma-u.5
for
100810238
gma-u.5
for
100790051
vvi-u.5
for
100246732
ppo-u.5
for
7485685
ppo-u.5
for
7468613
mtr-u.5
for
11427645
sly-u.5
for
101263053
sot-r.1
for
102596503
nta-r.1
for
107818409
nta-r.1
for
107787198
osa-u.5
for
4332383
zma-u.5
for
100304415
tae-r.2
for
123085420
tae-r.2
for
123092620
tae-r.2
for
123097929
hvu-r.1
for
123449038
sbi-r.1
for
110436881
bdi-r.1
for
100836380
cre-r.1
for
CHLRE_16g678050v5


Ortholog ID: 8894
Species ath bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT2G29210 LOC103868054 LOC125609450 LOC106436179 LOC106405802 LOC107942448 LOC107934350 LOC102608178 LOC100810238 LOC100790051 LOC100246732 LOC7485685 LOC7468613 LOC11427645 LOC101263053 LOC102596503 LOC107818409 LOC107787198 LOC4332383 LOC100304415 LOC123085420 LOC123092620 LOC123097929 LOC123449038 LOC110436881 LOC100836380 CHLRE_16g678050v5
Function* splicing factor PWI domain-containing protein serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1-like serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 uncharacterized LOC102608178 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 uncharacterized LOC100246732 uncharacterized LOC7485685 uncharacterized LOC7468613 serine/arginine repetitive matrix protein 1 uncharacterized LOC101263053 serine/arginine repetitive matrix protein 1 uncharacterized LOC107818409 uncharacterized LOC107787198 uncharacterized LOC4332383 splicing factor PWI domain-containing protein serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03015 mRNA surveillance pathway 2
bra03013 Nucleocytoplasmic transport 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03013 Nucleocytoplasmic transport 3
bna03015 mRNA surveillance pathway 3
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
cit03013 Nucleocytoplasmic transport 3
cit03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 4
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03015 mRNA surveillance pathway 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 4
tae03008 Ribosome biogenesis in eukaryotes 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03015 mRNA surveillance pathway 3
sbi03250 Viral life cycle - HIV-1 2
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 6
cre03018 RNA degradation 3
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817470 103868054 125609450 106436179 106405802 107942448 107934350 102608178 100810238 100790051 100246732 7485685 7468613 11427645 101263053 102596503 107818409 107787198 4332383 100304415 123085420 123092620 123097929 123449038 110436881 100836380 5721513
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