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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106353885   polyadenylation and cleavage factor homolog 1-like 
 ath-u.5   AT5G43620   Pre-mRNA cleavage complex II 
 ath-u.5   AT1G66500   Pre-mRNA cleavage complex II 
 ppo-u.5   7491724   uncharacterized LOC7491724 
 ppo-u.5   18106822   polyadenylation and cleavage factor homolog 1 

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Top 50 coexpressed genes to 106353885 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106353885 (bna-r.1 coexpression data)

CoexMap"106353885"


bnaLOC106353885 | Entrez gene ID : 106353885    
Species bna ath ppo tae mtr osa zma bdi vvi sbi sly nta cre sot hvu ghi gma cit bra
Paralog 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03015 [list] [network] mRNA surveillance pathway (420 genes)
GO BP
GO:0006369 [list] [network] termination of RNA polymerase II transcription  (14 genes)  IEA  
GO CC
GO:0005849 [list] [network] mRNA cleavage factor complex  (47 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0000993 [list] [network] RNA polymerase II complex binding  (46 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
Protein XP_048591922.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  plas 1  (predict for XP_048591922.1)
Subcellular
localization
TargetP
other 3  (predict for XP_048591922.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106353885

.
ath-u.5
for
AT5G43620

.
ath-u.5
for
AT1G66500

.
ppo-u.5
for
7491724

.
ppo-u.5
for
18106822

.


Ortholog ID: 18188
Species ath ath bra ppo ppo bna bna
Symbol AT5G43620 AT1G66500 LOC103831110 LOC7491724 LOC18106822 LOC106348573 LOC106353885
Function* Pre-mRNA cleavage complex II Pre-mRNA cleavage complex II polyadenylation and cleavage factor homolog 1 uncharacterized LOC7491724 polyadenylation and cleavage factor homolog 1 polyadenylation and cleavage factor homolog 5-like polyadenylation and cleavage factor homolog 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04626 Plant-pathogen interaction 2
bna03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834382 842968 103831110 7491724 18106822 106348573 106353885
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