ATTED-II : GeneCoexpression result

Species	Gene	Description
bra-r.6	103844355	probable E3 ubiquitin-protein ligase RHY1A
bna-r.1	106361630	probable E3 ubiquitin-protein ligase RHY1A
bna-r.1	106445638	probable E3 ubiquitin-protein ligase RHY1A
bna-r.1	111204018	uncharacterized LOC111204018
ath-u.5	AT2G15580	RING/U-box superfamily protein
ghi-r.1	121225243	E3 ubiquitin-protein ligase ZNRF3
ghi-r.1	107938031	E3 ubiquitin-protein ligase ZNRF3
ghi-r.1	107909580	probable E3 ubiquitin-protein ligase RHY1A
cit-r.1	102616965	probable E3 ubiquitin-protein ligase RHY1A
gma-u.5	100790524	probable E3 ubiquitin-protein ligase RHY1A
gma-u.5	100500350	uncharacterized LOC100500350
gma-u.5	100527583	uncharacterized LOC100527583
vvi-u.5	100241393	probable E3 ubiquitin-protein ligase RHY1A
ppo-u.5	7470041	probable E3 ubiquitin-protein ligase RHY1A
mtr-u.5	25488383	probable E3 ubiquitin-protein ligase RHY1A
sly-u.5	101250706	probable E3 ubiquitin-protein ligase RHY1A
sot-r.1	102590705	uncharacterized LOC102590705
sot-r.1	102590358	E3 ubiquitin-protein ligase RING1-like
nta-r.1	107801626	uncharacterized LOC107801626
nta-r.1	107759976	uncharacterized LOC107759976
osa-u.5	4340307	receptor homology region, transmembrane domain- and RING domain-containing protein 6
osa-u.5	4331022	uncharacterized LOC4331022
zma-u.5	100283924	uncharacterized LOC100283924
zma-u.5	103627863	RING/U-box superfamily protein
tae-r.2	123145938	probable E3 ubiquitin-protein ligase HIP1
tae-r.2	123139174	probable E3 ubiquitin-protein ligase RHY1A
hvu-r.1	123412783	E3 ubiquitin-protein ligase TTC3-like
hvu-r.1	123405448	probable E3 ubiquitin-protein ligase RHY1A
sbi-r.1	110431252	E3 ubiquitin-protein ligase RLIM-like
sbi-r.1	8056392	RING-H2 finger protein ATL80
bdi-r.1	100830912	uncharacterized LOC100830912
bdi-r.1	100833275	probable E3 ubiquitin-protein ligase RHY1A

Annotation

functional annotation

Function

probable E3 ubiquitin-protein ligase RHY1A

KEGG

GO BP

GO CC

GO MF

Protein

XP_009119405.1 [sequence] [blastp]
XP_018510997.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, cyto 3, mito 3, cyto_nucl 3	(predict for XP_009119405.1)
nucl 4, chlo 3, mito 2, cysk_nucl 2, nucl_plas 2	(predict for XP_018510997.1)

Subcellular
localization
TargetP

mito 7	(predict for XP_009119405.1)
mito 7	(predict for XP_018510997.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103844355	bna-r.1 for 106361630	bna-r.1 for 106445638	bna-r.1 for 111204018	ath-u.5 for AT2G15580	ghi-r.1 for 121225243	ghi-r.1 for 107938031	ghi-r.1 for 107909580	cit-r.1 for 102616965	gma-u.5 for 100790524	gma-u.5 for 100500350	gma-u.5 for 100527583	vvi-u.5 for 100241393	ppo-u.5 for 7470041	mtr-u.5 for 25488383	sly-u.5 for 101250706	sot-r.1 for 102590705	sot-r.1 for 102590358	nta-r.1 for 107801626	nta-r.1 for 107759976	osa-u.5 for 4340307	osa-u.5 for 4331022	zma-u.5 for 100283924	zma-u.5 for 103627863	tae-r.2 for 123145938	tae-r.2 for 123139174	hvu-r.1 for 123412783	hvu-r.1 for 123405448	sbi-r.1 for 110431252	sbi-r.1 for 8056392	bdi-r.1 for 100830912	bdi-r.1 for 100833275

Please wait a moment.

Ortholog

Ortholog ID: 3901

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

probable E3 ubiquitin-protein ligase RHY1A

uncharacterized LOC111204018

RING/U-box superfamily protein

E3 ubiquitin-protein ligase ZNRF3

probable E3 ubiquitin-protein ligase RHY1A

uncharacterized LOC107962551

probable E3 ubiquitin-protein ligase RHY1A

uncharacterized LOC100500350

uncharacterized LOC100527583

probable E3 ubiquitin-protein ligase RHY1A

uncharacterized LOC102590705

E3 ubiquitin-protein ligase RING1-like

uncharacterized LOC107801626

uncharacterized LOC107759976

uncharacterized LOC107776374

receptor homology region, transmembrane domain- and RING domain-containing protein 6

uncharacterized LOC4331022

uncharacterized LOC100283924

RING/U-box superfamily protein

probable E3 ubiquitin-protein ligase RHY1A

E3 ubiquitin-protein ligase Iruka

E3 ubiquitin-protein ligase TTC3-like

probable E3 ubiquitin-protein ligase RHY1A

uncharacterized LOC123402617

E3 ubiquitin-protein ligase RLIM-like

RING-H2 finger protein ATL80

uncharacterized LOC100830912

probable E3 ubiquitin-protein ligase RHY1A

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00071	Fatty acid degradation	3
ghi00061	Fatty acid biosynthesis	2
ghi01212	Fatty acid metabolism	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	4
cit00630	Glyoxylate and dicarboxylate metabolism	3
cit00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00196	Photosynthesis - antenna proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	3
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	4
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00195	Photosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3

Expression

Expression pattern

Entrez Gene ID^*

103844355

106361630

106445638

111204018

816051

121225243

107909580

107962551

102616965

100790524

100500350

100527583

100241393

7470041

25488383

101250706

102590705

102590358

107801626

107759976

107776374

4340307

4331022

100283924

103627863

123139174

123165795

123412783

123405448

123402617

110431252

8056392

100830912

100833275

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103844355 (bra-r.6 coexpression data)

Top 50 enrichment test to 103844355 (bra-r.6 coexpression data)


Species	bra	bna	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	3	1	3	1	3	1	1	1	1	2	2	2	2	2	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103844355 (bra-r.6 coexpression data)

Top 50 enrichment test to 103844355 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**