ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-r.7	100801613	uncharacterized LOC100801613
gma-u.5	100801613	uncharacterized LOC100801613
gma-u.5	100799360	uncharacterized LOC100799360
gma-u.5	100820457	uncharacterized LOC100820457
gma-u.5	100787535	uncharacterized LOC100787535
mtr-u.5	11415815	uncharacterized LOC11415815
ppo-u.5	18099208	golgin candidate 5
ppo-u.5	7480179	uncharacterized LOC7480179
ath-u.5	AT2G17990	polyamine-modulated factor 1-binding protein
ath-u.5	AT5G66250	kinectin-like protein
bra-r.6	103874092	tropomyosin alpha-1 chain
bra-r.6	103828440	kinesin-like protein KIN-7K, chloroplastic
bra-r.6	103837677	uncharacterized LOC103837677
vvi-u.5	100262595	uncharacterized LOC100262595
ghi-r.1	107909445	uncharacterized LOC107909445
ghi-r.1	107912800	uncharacterized LOC107912800
ghi-r.1	107913003	uncharacterized LOC107913003
bna-r.1	BNAC07G48120D	uncharacterized BNAC07G48120D
bna-r.1	106392255	golgin subfamily A member 5
bna-r.1	106389478	kinesin-like protein KIN-7K, chloroplastic
cit-r.1	102615546	uncharacterized LOC102615546
sly-u.5	101257129	uncharacterized LOC101257129
sly-u.5	101246997	uncharacterized LOC101246997
sot-r.1	102589741	uncharacterized LOC102589741
sot-r.1	102586875	uncharacterized LOC102586875
nta-r.1	107823025	uncharacterized LOC107823025
nta-r.1	107776137	uncharacterized LOC107776137
nta-r.1	107775258	uncharacterized LOC107775258
osa-u.5	4342071	uncharacterized LOC4342071
zma-u.5	100192653	uncharacterized LOC100192653
tae-r.2	123157204	uncharacterized LOC123157204
tae-r.2	123148285	uncharacterized LOC123148285
tae-r.2	123164963	uncharacterized LOC123164963
hvu-r.1	123407497	uncharacterized LOC123407497
sbi-r.1	110431225	uncharacterized LOC110431225
bdi-r.1	100838451	uncharacterized LOC100838451

Annotation

functional annotation

Function

uncharacterized LOC100801613

KEGG

GO BP

GO:0009959 [list] [network] negative gravitropism	(20 genes)	IEA
GO:0009639 [list] [network] response to red or far red light	(71 genes)	IEA

GO CC

GO MF

Protein

XP_003547943.1 [sequence] [blastp]
XP_040866411.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, chlo 2, plas 1, chlo_mito 1, cyto_pero 1	(predict for XP_003547943.1)
cyto 3, chlo 2, plas 1, chlo_mito 1, cyto_pero 1	(predict for XP_040866411.1)

Subcellular
localization
TargetP

other 7, chlo 3	(predict for XP_003547943.1)
other 7, chlo 3	(predict for XP_040866411.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-r.7 for 100801613	gma-u.5 for 100801613	gma-u.5 for 100799360	gma-u.5 for 100820457	gma-u.5 for 100787535	mtr-u.5 for 11415815	ppo-u.5 for 18099208	ppo-u.5 for 7480179	ath-u.5 for AT2G17990	ath-u.5 for AT5G66250	bra-r.6 for 103874092	bra-r.6 for 103828440	bra-r.6 for 103837677	vvi-u.5 for 100262595	ghi-r.1 for 107909445	ghi-r.1 for 107912800	ghi-r.1 for 107913003	bna-r.1 for BNAC07G48120D	bna-r.1 for 106392255	bna-r.1 for 106389478	cit-r.1 for 102615546	sly-u.5 for 101257129	sly-u.5 for 101246997	sot-r.1 for 102589741	sot-r.1 for 102586875	nta-r.1 for 107823025	nta-r.1 for 107776137	nta-r.1 for 107775258	osa-u.5 for 4342071	zma-u.5 for 100192653	tae-r.2 for 123157204	tae-r.2 for 123148285	tae-r.2 for 123164963	hvu-r.1 for 123407497	sbi-r.1 for 110431225	bdi-r.1 for 100838451

Please wait a moment.

Ortholog

Ortholog ID: 4516

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100801613

uncharacterized LOC100799360

uncharacterized LOC100787535

uncharacterized LOC11415815

golgin candidate 5

uncharacterized LOC7480179

polyamine-modulated factor 1-binding protein

kinectin-like protein

tropomyosin alpha-1 chain

kinesin-like protein KIN-7K, chloroplastic

uncharacterized LOC103837677

uncharacterized LOC100262595

uncharacterized LOC107909445

uncharacterized LOC107913003

uncharacterized LOC107936559

uncharacterized BNAC07G48120D

golgin subfamily A member 5

golgin subfamily A member 5-like

uncharacterized LOC102615546

uncharacterized LOC101257129

uncharacterized LOC101246997

uncharacterized LOC102589741

uncharacterized LOC102586875

uncharacterized LOC107776137

uncharacterized LOC107775258

uncharacterized LOC107778890

uncharacterized LOC4342071

uncharacterized LOC100192653

uncharacterized LOC123157204

uncharacterized LOC123148285

uncharacterized LOC123164963

uncharacterized LOC123407497

uncharacterized LOC110431225

uncharacterized LOC100838451

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	2
gma00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00020	Citrate cycle (TCA cycle)	2
bra01200	Carbon metabolism	2
bra01230	Biosynthesis of amino acids	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	3
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04130	SNARE interactions in vesicular transport	3
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	5
sly04814	Motor proteins	3
sly04142	Lysosome	2
sly05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2
sot03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	6
nta04141	Protein processing in endoplasmic reticulum	4
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta04141	Protein processing in endoplasmic reticulum	3
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	3
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	4
bdi04136	Autophagy - other	3

Expression

Expression pattern

Entrez Gene ID^*

100801613

100799360

100787535

11415815

18099208

7480179

816311

836757

103874092

103828440

103837677

100262595

107909445

107913003

107936559

106396714

106392255

106362750

102615546

101257129

101246997

102589741

102586875

107776137

107775258

107778890

4342071

100192653

123157204

123148285

123164963

123407497

110431225

100838451

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100801613 (gma-r.7 coexpression data)

Top 50 enrichment test to 100801613 (gma-r.7 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	1	2	2	3	1	3	3	1	2	2	3	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100801613 (gma-r.7 coexpression data)

Top 50 enrichment test to 100801613 (gma-r.7 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**