ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4342071	uncharacterized LOC4342071
osa-r.6	4342071	uncharacterized LOC4342071
osa-m.8	4342071	uncharacterized LOC4342071
osa-e.1	4342071	uncharacterized LOC4342071
tae-r.2	123157204	uncharacterized LOC123157204
tae-r.2	123148285	uncharacterized LOC123148285
tae-r.2	123164963	uncharacterized LOC123164963
hvu-r.1	123407497	uncharacterized LOC123407497
bdi-r.1	100838451	uncharacterized LOC100838451
zma-u.5	100192653	uncharacterized LOC100192653
sbi-r.1	110431225	uncharacterized LOC110431225
ath-u.5	AT2G17990	polyamine-modulated factor 1-binding protein
ath-u.5	AT5G66250	kinectin-like protein
gma-u.5	100801613	uncharacterized LOC100801613
gma-u.5	100787535	uncharacterized LOC100787535
gma-u.5	100820457	uncharacterized LOC100820457
sly-u.5	101257129	uncharacterized LOC101257129
sly-u.5	101246997	uncharacterized LOC101246997
bra-r.6	103837677	uncharacterized LOC103837677
bra-r.6	103874092	tropomyosin alpha-1 chain
bra-r.6	103828440	kinesin-like protein KIN-7K, chloroplastic
vvi-u.5	100262595	uncharacterized LOC100262595
ppo-u.5	18099208	golgin candidate 5
ppo-u.5	7480179	uncharacterized LOC7480179
mtr-u.5	11415815	uncharacterized LOC11415815
ghi-r.1	107909445	uncharacterized LOC107909445
ghi-r.1	107912800	uncharacterized LOC107912800
ghi-r.1	107913003	uncharacterized LOC107913003
bna-r.1	BNAC07G48120D	uncharacterized BNAC07G48120D
bna-r.1	106392255	golgin subfamily A member 5
bna-r.1	106389478	kinesin-like protein KIN-7K, chloroplastic
sot-r.1	102589741	uncharacterized LOC102589741
sot-r.1	102586875	uncharacterized LOC102586875
cit-r.1	102615546	uncharacterized LOC102615546
nta-r.1	107823025	uncharacterized LOC107823025
nta-r.1	107776137	uncharacterized LOC107776137
nta-r.1	107775258	uncharacterized LOC107775258

Annotation

functional annotation

KEGG

GO BP

GO:0009959 [list] [network] negative gravitropism	(9 genes)	IEA
GO:0009639 [list] [network] response to red or far red light	(33 genes)	IEA

GO CC

GO MF

Protein

NP_001408843.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 2, mito 1, cysk 1

(predict for NP_001408843.1)

Subcellular
localization
TargetP

other 8

(predict for NP_001408843.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4342071	osa-r.6 for 4342071	osa-m.8 for 4342071	osa-e.1 for 4342071	tae-r.2 for 123157204	tae-r.2 for 123148285	tae-r.2 for 123164963	hvu-r.1 for 123407497	bdi-r.1 for 100838451	zma-u.5 for 100192653	sbi-r.1 for 110431225	ath-u.5 for AT2G17990	ath-u.5 for AT5G66250	gma-u.5 for 100801613	gma-u.5 for 100787535	gma-u.5 for 100820457	sly-u.5 for 101257129	sly-u.5 for 101246997	bra-r.6 for 103837677	bra-r.6 for 103874092	bra-r.6 for 103828440	vvi-u.5 for 100262595	ppo-u.5 for 18099208	ppo-u.5 for 7480179	mtr-u.5 for 11415815	ghi-r.1 for 107909445	ghi-r.1 for 107912800	ghi-r.1 for 107913003	bna-r.1 for BNAC07G48120D	bna-r.1 for 106392255	bna-r.1 for 106389478	sot-r.1 for 102589741	sot-r.1 for 102586875	cit-r.1 for 102615546	nta-r.1 for 107823025	nta-r.1 for 107776137	nta-r.1 for 107775258

Ortholog

Ortholog ID: 4516

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC4342071

uncharacterized LOC123157204

uncharacterized LOC123148285

uncharacterized LOC123164963

uncharacterized LOC123407497

uncharacterized LOC100838451

uncharacterized LOC100192653

uncharacterized LOC110431225

polyamine-modulated factor 1-binding protein

kinectin-like protein

uncharacterized LOC100801613

uncharacterized LOC100787535

uncharacterized LOC100799360

uncharacterized LOC101257129

uncharacterized LOC101246997

uncharacterized LOC103837677

tropomyosin alpha-1 chain

kinesin-like protein KIN-7K, chloroplastic

uncharacterized LOC100262595

golgin candidate 5

uncharacterized LOC7480179

uncharacterized LOC11415815

uncharacterized LOC107909445

uncharacterized LOC107913003

uncharacterized LOC107936559

uncharacterized BNAC07G48120D

golgin subfamily A member 5

golgin subfamily A member 5-like

uncharacterized LOC102589741

uncharacterized LOC102586875

uncharacterized LOC102615546

uncharacterized LOC107776137

uncharacterized LOC107775258

uncharacterized LOC107778890

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	4
bdi04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	2
gma00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	5
sly04814	Motor proteins	3
sly04142	Lysosome	2
sly05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00020	Citrate cycle (TCA cycle)	2
bra01200	Carbon metabolism	2
bra01230	Biosynthesis of amino acids	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	3
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2
sot03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04130	SNARE interactions in vesicular transport	3
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	6
nta04141	Protein processing in endoplasmic reticulum	4
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta04141	Protein processing in endoplasmic reticulum	3
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	3
nta04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

4342071

123157204

123148285

123164963

123407497

100838451

100192653

110431225

816311

836757

100801613

100787535

100799360

101257129

101246997

103837677

103874092

103828440

100262595

18099208

7480179

11415815

107909445

107913003

107936559

106396714

106392255

106362750

102589741

102586875

102615546

107776137

107775258

107778890

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4342071 (osa-u.5 coexpression data)

Top 50 enrichment test to 4342071 (osa-u.5 coexpression data)


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	1	1	1	1	2	3	2	3	1	2	1	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4342071 (osa-u.5 coexpression data)

Top 50 enrichment test to 4342071 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**