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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-r.7   100808258   pentatricopeptide repeat-containing protein At4g33170 
 gma-u.5   100808258   pentatricopeptide repeat-containing protein At4g33170 
 gma-u.5   100792064   pentatricopeptide repeat-containing protein At4g33170 
 vvi-u.5   100241570   putative pentatricopeptide repeat-containing protein At5g52630 
 ghi-r.1   107940135   putative pentatricopeptide repeat-containing protein At5g52630 
 ghi-r.1   107932103   putative pentatricopeptide repeat-containing protein At5g52630 
 cit-r.1   102628290   putative pentatricopeptide repeat-containing protein At5g52630 
 sly-u.5   101261216   putative pentatricopeptide repeat-containing protein At5g52630 
 sot-r.1   102597605   putative pentatricopeptide repeat-containing protein At5g52630 
 nta-r.1   107785745   putative pentatricopeptide repeat-containing protein At5g52630 
 nta-r.1   107830834   putative pentatricopeptide repeat-containing protein At5g52630 
 zma-u.5   100281446   vegetative storage protein 
 zma-u.5   103642182   pentatricopeptide repeat-containing protein, mitochondrial-like 
 sbi-r.1   8080591   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 bdi-r.1   100821960   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 

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Top 50 coexpressed genes to 100808258 (gma-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100808258 (gma-r.7 coexpression data)

CoexMap"100808258"


gmaLOC100808258 | Entrez gene ID : 100808258      
Species gma vvi ghi cit sly sot nta zma sbi bdi cre bra ppo ath mtr hvu bna tae osa
Paralog 3 1 2 1 1 1 2 2 1 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006580089.1 [sequence] [blastp]
XP_006580090.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  E.R. 2,  golg 1,  E.R._vacu 1  (predict for XP_006580089.1)
plas 5,  E.R. 2,  golg 1,  E.R._vacu 1  (predict for XP_006580090.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006580089.1)
other 9  (predict for XP_006580090.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-r.7
for
100808258
gma-u.5
for
100808258
gma-u.5
for
100792064
vvi-u.5
for
100241570
ghi-r.1
for
107940135
ghi-r.1
for
107932103
cit-r.1
for
102628290
sly-u.5
for
101261216
sot-r.1
for
102597605
nta-r.1
for
107785745
nta-r.1
for
107830834
zma-u.5
for
100281446
zma-u.5
for
103642182
sbi-r.1
for
8080591
bdi-r.1
for
100821960


Ortholog ID: 13500
Species gma gma vvi ghi ghi cit sly sot nta nta zma zma sbi bdi
Symbol LOC100808258 LOC100792064 LOC100241570 LOC107940135 LOC107932103 LOC102628290 LOC101261216 LOC102597605 LOC107785745 LOC107830834 LOC100281446 LOC103642182 LOC8080591 LOC100821960
Function* pentatricopeptide repeat-containing protein At4g33170 pentatricopeptide repeat-containing protein At4g33170 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 vegetative storage protein pentatricopeptide repeat-containing protein, mitochondrial-like pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100808258 100792064 100241570 107940135 107932103 102628290 101261216 102597605 107785745 107830834 100281446 103642182 8080591 100821960
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