Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  100808258  pentatricopeptide repeat-containing protein At4g33170 
 gma-r.7  100808258  pentatricopeptide repeat-containing protein At4g33170 
 gma-u.5  100792064  pentatricopeptide repeat-containing protein At4g33170 
 vvi-u.5  100241570  putative pentatricopeptide repeat-containing protein At5g52630 
 sly-u.5  101261216  putative pentatricopeptide repeat-containing protein At5g52630 
 zma-u.5  100281446  vegetative storage protein 
 zma-u.5  103642182  pentatricopeptide repeat-containing protein, mitochondrial-like 

close


Top 50 coexpressed genes to 100808258 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100808258 (gma-u.5 coexpression data)

CoexMap"100808258"


gmaLOC100808258 | Entrez gene ID : 100808258
Species gma vvi sly zma ppo hvu mtr osa sot tae nta bra cit ghi bna bdi ath sbi cre
Paralog 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006580089.1 [sequence] [blastp]
XP_006580090.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  E.R. 2,  golg 1,  E.R._vacu 1  (predict for XP_006580089.1)
plas 5,  E.R. 2,  golg 1,  E.R._vacu 1  (predict for XP_006580090.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006580089.1)
other 9  (predict for XP_006580090.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100808258

.

gma-r.7
for
100808258

.

gma-u.5
for
100792064

.

vvi-u.5
for
100241570

.

sly-u.5
for
101261216

.

zma-u.5
for
100281446

.

zma-u.5
for
103642182

.


Ortholog ID: 13500
Species gma gma sly zma zma vvi ghi ghi sbi sot cit bdi nta nta
Symbol LOC100792064 LOC100808258 LOC101261216 LOC103642182 LOC100281446 LOC100241570 LOC107940135 LOC107932103 LOC8080591 LOC102597605 LOC102628290 LOC100821960 LOC107785745 LOC107830834
Function* pentatricopeptide repeat-containing protein At4g33170 pentatricopeptide repeat-containing protein At4g33170 putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein, mitochondrial-like vegetative storage protein putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At2g03880, mitochondrial putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At2g03880, mitochondrial putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100792064 100808258 101261216 103642182 100281446 100241570 107940135 107932103 8080591 102597605 102628290 100821960 107785745 107830834
The preparation time of this page was 0.3 [sec].