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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   RSP13   ribosomal protein S13 
 gma-r.7   RSP13   ribosomal protein S13 
 gma-m.5   RSP13   ribosomal protein S13 
 mtr-u.5   11443905   small ribosomal subunit protein S13, mitochondrial 
 ppo-u.5   7463178   small ribosomal subunit protein S13, mitochondrial 
 ath-u.5   AT1G77750   Ribosomal protein S13/S18 family 
 bra-r.6   103832205   small ribosomal subunit protein S13, mitochondrial 
 bra-r.6   103853096   small ribosomal subunit protein S13, mitochondrial 
 ghi-r.1   107962486   small ribosomal subunit protein S13, mitochondrial 
 ghi-r.1   107916638   small ribosomal subunit protein S13, mitochondrial 
 bna-r.1   125589172   small ribosomal subunit protein S13, mitochondrial 
 bna-r.1   125587902   small ribosomal subunit protein S13, mitochondrial-like 
 bna-r.1   106412066   small ribosomal subunit protein S13, mitochondrial 
 cit-r.1   102606874   small ribosomal subunit protein S13, mitochondrial 

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Top 50 coexpressed genes to RSP13 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RSP13 (gma-u.5 coexpression data)

CoexMap"100527465"


gmaRSP13 | Entrez gene ID : 100527465      
Species gma mtr ppo ath bra ghi bna cit sbi osa sot sly tae hvu vvi zma cre nta bdi
Paralog 3 1 1 1 2 2 3 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (172 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (1058 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein NP_001387313.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 3,  chlo 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001387313.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_001387313.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
RSP13
gma-r.7
for
RSP13
gma-m.5
for
RSP13
mtr-u.5
for
11443905
ppo-u.5
for
7463178
ath-u.5
for
AT1G77750
bra-r.6
for
103832205
bra-r.6
for
103853096
ghi-r.1
for
107962486
ghi-r.1
for
107916638
bna-r.1
for
125589172
bna-r.1
for
125587902
bna-r.1
for
106412066
cit-r.1
for
102606874


Ortholog ID: 13232
Species gma mtr ppo ath bra bra ghi ghi bna bna bna cit
Symbol RSP13 LOC11443905 LOC7463178 AT1G77750 LOC103832205 LOC103853096 LOC107962486 LOC107916638 LOC106412066 LOC106397768 LOC106357347 LOC102606874
Function* ribosomal protein S13 small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial Ribosomal protein S13/S18 family small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial-like small ribosomal subunit protein S13, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03410 Base excision repair 3
gma03030 DNA replication 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 6
ppo03040 Spliceosome 3
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 11
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 13
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03008 Ribosome biogenesis in eukaryotes 2
cit00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100527465 11443905 7463178 844111 103832205 103853096 107962486 107916638 106412066 106397768 106357347 102606874
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