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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100778693   protein BONZAI 1 
 gma-r.7   100778693   protein BONZAI 1 
 gma-u.5   100805122   pentatricopeptide repeat-containing protein At3g14730 
 mtr-u.5   25493389   pentatricopeptide repeat-containing protein At3g14730 
 ath-u.5   AT3G14730   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100262464   pentatricopeptide repeat-containing protein At3g14730 
 sly-u.5   101254106   pentatricopeptide repeat-containing protein At3g14730 
 osa-u.5   9266068   pentatricopeptide repeat-containing protein At3g14730 

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Top 50 coexpressed genes to 100778693 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100778693 (gma-u.5 coexpression data)

CoexMap"100778693"


gmaLOC100778693 | Entrez gene ID : 100778693      
Species gma mtr ath vvi sly osa sot hvu tae cit sbi ppo zma ghi cre bna nta bdi bra
Paralog 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071277 [list] [network] cellular response to calcium ion  (11 genes)  IEA  
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (1870 genes)  IEA  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0005544 [list] [network] calcium-dependent phospholipid binding  (32 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003541443.1 [sequence] [blastp]
XP_040864065.1 [sequence] [blastp]
XP_040864066.1 [sequence] [blastp]
XP_040864067.1 [sequence] [blastp]
XP_040864068.1 [sequence] [blastp]
XP_040864069.1 [sequence] [blastp]
XP_040864070.1 [sequence] [blastp]
XP_040864071.1 [sequence] [blastp]
XP_040864072.1 [sequence] [blastp]
XP_040864073.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1  (predict for XP_003541443.1)
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_040864065.1)
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_040864066.1)
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_040864067.1)
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_040864068.1)
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_040864069.1)
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_040864070.1)
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_040864071.1)
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_040864072.1)
cyto 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_040864073.1)
Subcellular
localization
TargetP
other 5  (predict for XP_003541443.1)
mito 8  (predict for XP_040864065.1)
mito 8  (predict for XP_040864066.1)
mito 8  (predict for XP_040864067.1)
mito 8  (predict for XP_040864068.1)
mito 8  (predict for XP_040864069.1)
mito 8  (predict for XP_040864070.1)
mito 8  (predict for XP_040864071.1)
mito 8  (predict for XP_040864072.1)
mito 8  (predict for XP_040864073.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100778693

.
gma-r.7
for
100778693

.
gma-u.5
for
100805122

.
mtr-u.5
for
25493389

.
ath-u.5
for
AT3G14730

.
vvi-u.5
for
100262464

.
sly-u.5
for
101254106

.
osa-u.5
for
9266068

.


Ortholog ID: 11300
Species ath gma gma sly osa bra vvi mtr hvu ghi ghi sbi sot cit bdi nta nta
Symbol AT3G14730 LOC100805122 LOC100778693 LOC101254106 LOC9266068 LOC103841841 LOC100262464 LOC25493389 LOC123444708 LOC121217694 LOC107958466 LOC8055300 LOC102579314 LOC102612831 LOC104583342 LOC107775002 LOC107788401
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g14730 protein BONZAI 1 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730-like pentatricopeptide repeat-containing protein At3g14730-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00190 Oxidative phosphorylation 2
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820701 100805122 100778693 101254106 9266068 103841841 100262464 25493389 123444708 121217694 107958466 8055300 102579314 102612831 104583342 107775002 107788401
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