Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100805122   pentatricopeptide repeat-containing protein At3g14730 
 gma-r.7   100805122   pentatricopeptide repeat-containing protein At3g14730 
 gma-u.5   100778693   protein BONZAI 1 
 mtr-u.5   25493389   pentatricopeptide repeat-containing protein At3g14730 
 ath-u.5   AT3G14730   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100262464   pentatricopeptide repeat-containing protein At3g14730 
 sly-u.5   101254106   pentatricopeptide repeat-containing protein At3g14730 
 osa-u.5   9266068   pentatricopeptide repeat-containing protein At3g14730 

close


Top 50 coexpressed genes to 100805122 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100805122 (gma-u.5 coexpression data)

CoexMap"100805122"


gmaLOC100805122 | Entrez gene ID : 100805122    
Species gma mtr ath vvi sly osa hvu zma bna cit bra ghi ppo sbi bdi nta tae cre sot
Paralog 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_025985482.1 [sequence] [blastp]
XP_025985483.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo_mito 4,  chlo 3,  cyto_mito 3  (predict for XP_025985482.1)
mito 5,  chlo_mito 4,  chlo 3,  cyto_mito 3  (predict for XP_025985483.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for XP_025985482.1)
mito 7,  other 3  (predict for XP_025985483.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100805122
gma-r.7
for
100805122
gma-u.5
for
100778693
mtr-u.5
for
25493389
ath-u.5
for
AT3G14730
vvi-u.5
for
100262464
sly-u.5
for
101254106
osa-u.5
for
9266068


Ortholog ID: 11300
Species gma gma mtr ath bra vvi ghi ghi cit sly sot nta nta osa hvu sbi bdi
Symbol LOC100805122 LOC100778693 LOC25493389 AT3G14730 LOC103841841 LOC100262464 LOC121217694 LOC107958466 LOC102612831 LOC101254106 LOC102579314 LOC107775002 LOC107788401 LOC9266068 LOC123444708 LOC8055300 LOC104583342
Function* pentatricopeptide repeat-containing protein At3g14730 protein BONZAI 1 pentatricopeptide repeat-containing protein At3g14730 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730-like pentatricopeptide repeat-containing protein At3g14730-like pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00190 Oxidative phosphorylation 2
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100805122 100778693 25493389 820701 103841841 100262464 121217694 107958466 102612831 101254106 102579314 107775002 107788401 9266068 123444708 8055300 104583342
The preparation time of this page was 0.2 [sec].