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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102579314   pentatricopeptide repeat-containing protein At3g14730 
 sly-u.5   101254106   pentatricopeptide repeat-containing protein At3g14730 
 nta-r.1   107788401   pentatricopeptide repeat-containing protein At3g14730-like 
 nta-r.1   107775002   pentatricopeptide repeat-containing protein At3g14730-like 
 ath-u.5   AT3G14730   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100805122   pentatricopeptide repeat-containing protein At3g14730 
 gma-u.5   100778693   protein BONZAI 1 
 bra-r.6   103841841   pentatricopeptide repeat-containing protein At3g14730 
 vvi-u.5   100262464   pentatricopeptide repeat-containing protein At3g14730 
 mtr-u.5   25493389   pentatricopeptide repeat-containing protein At3g14730 
 ghi-r.1   121217694   pentatricopeptide repeat-containing protein At3g14730 
 ghi-r.1   107958466   pentatricopeptide repeat-containing protein At3g14730 
 cit-r.1   102612831   pentatricopeptide repeat-containing protein At3g14730 
 osa-u.5   9266068   pentatricopeptide repeat-containing protein At3g14730 
 hvu-r.1   123444708   pentatricopeptide repeat-containing protein At3g14730 
 sbi-r.1   8055300   pentatricopeptide repeat-containing protein At3g14730 
 bdi-r.1   104583342   pentatricopeptide repeat-containing protein At3g14730 

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Top 50 coexpressed genes to 102579314 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102579314 (sot-r.1 coexpression data)

CoexMap"102579314"


sotLOC102579314 | Entrez gene ID : 102579314      
Species sot sly nta ath gma bra vvi mtr ghi cit osa hvu sbi bdi zma cre ppo tae bna
Paralog 1 1 2 1 2 1 1 1 2 1 1 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006367743.1 [sequence] [blastp]
XP_015161111.1 [sequence] [blastp]
XP_015161112.1 [sequence] [blastp]
XP_015161113.1 [sequence] [blastp]
XP_015161114.1 [sequence] [blastp]
XP_015161115.1 [sequence] [blastp]
XP_015161116.1 [sequence] [blastp]
XP_015161117.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  cyto_mito 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_006367743.1)
chlo 4,  mito 2,  cyto_mito 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_015161111.1)
chlo 4,  mito 2,  cyto_mito 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_015161112.1)
chlo 4,  mito 2,  cyto_mito 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_015161113.1)
chlo 4,  mito 2,  cyto_mito 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_015161114.1)
chlo 4,  mito 2,  cyto_mito 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_015161115.1)
cyto 8,  chlo 1  (predict for XP_015161116.1)
cyto 8,  chlo 1  (predict for XP_015161117.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_006367743.1)
mito 7  (predict for XP_015161111.1)
mito 7  (predict for XP_015161112.1)
mito 7  (predict for XP_015161113.1)
mito 7  (predict for XP_015161114.1)
mito 7  (predict for XP_015161115.1)
other 7  (predict for XP_015161116.1)
other 7  (predict for XP_015161117.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102579314
sly-u.5
for
101254106
nta-r.1
for
107788401
nta-r.1
for
107775002
ath-u.5
for
AT3G14730
gma-u.5
for
100805122
gma-u.5
for
100778693
bra-r.6
for
103841841
vvi-u.5
for
100262464
mtr-u.5
for
25493389
ghi-r.1
for
121217694
ghi-r.1
for
107958466
cit-r.1
for
102612831
osa-u.5
for
9266068
hvu-r.1
for
123444708
sbi-r.1
for
8055300
bdi-r.1
for
104583342


Ortholog ID: 11300
Species sot sly nta nta ath gma gma bra vvi mtr ghi ghi cit osa hvu sbi bdi
Symbol LOC102579314 LOC101254106 LOC107788401 LOC107775002 AT3G14730 LOC100805122 LOC100778693 LOC103841841 LOC100262464 LOC25493389 LOC121217694 LOC107958466 LOC102612831 LOC9266068 LOC123444708 LOC8055300 LOC104583342
Function* pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730-like pentatricopeptide repeat-containing protein At3g14730-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g14730 protein BONZAI 1 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00190 Oxidative phosphorylation 2
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102579314 101254106 107788401 107775002 820701 100805122 100778693 103841841 100262464 25493389 121217694 107958466 102612831 9266068 123444708 8055300 104583342
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