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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100790744   E3 ubiquitin-protein ligase BRE1-like 1 
 gma-r.7   100790744   E3 ubiquitin-protein ligase BRE1-like 1 
 gma-u.5   100790337   E3 ubiquitin-protein ligase BRE1-like 1 
 gma-u.5   100811776   E3 ubiquitin-protein ligase BRE1-like 2 
 gma-u.5   100796610   E3 ubiquitin-protein ligase BRE1-like 2 
 mtr-u.5   25494911   E3 ubiquitin-protein ligase BRE1-like 2 
 mtr-u.5   25484108   E3 ubiquitin-protein ligase BRE1-like 2 
 mtr-u.5   11436813   E3 ubiquitin-protein ligase BRE1-like 1 
 ppo-u.5   7453935   E3 ubiquitin-protein ligase BRE1-like 1 
 ppo-u.5   7455740   E3 ubiquitin-protein ligase BRE1-like 2 
 ath-u.5   HUB1   histone mono-ubiquitination 1 
 ath-u.5   HUB2   histone mono-ubiquitination 2 
 bra-r.6   103866184   E3 ubiquitin-protein ligase BRE1-like 1 
 bra-r.6   103832600   E3 ubiquitin-protein ligase BRE1-like 2 
 bra-r.6   103866851   E3 ubiquitin-protein ligase BRE1-like 1 
 vvi-u.5   100241021   E3 ubiquitin-protein ligase BRE1-like 1 
 vvi-u.5   100251829   E3 ubiquitin-protein ligase BRE1-like 2 
 ghi-r.1   121223688   E3 ubiquitin-protein ligase BRE1-like 1 
 ghi-r.1   107937439   E3 ubiquitin-protein ligase BRE1-like 1 
 ghi-r.1   107933771   E3 ubiquitin-protein ligase BRE1-like 1 
 bna-r.1   106396402   E3 ubiquitin-protein ligase BRE1-like 1 
 bna-r.1   106371217   E3 ubiquitin-protein ligase BRE1-like 1 
 bna-r.1   106433603   E3 ubiquitin-protein ligase BRE1-like 2 
 cit-r.1   102612288   E3 ubiquitin-protein ligase BRE1-like 1 
 cit-r.1   102624474   E3 ubiquitin-protein ligase BRE1-like 2 
 sly-u.5   101254859   E3 ubiquitin-protein ligase BRE1-like 1 
 sly-u.5   101264751   E3 ubiquitin-protein ligase BRE1-like 2 
 sot-r.1   102583070   E3 ubiquitin-protein ligase BRE1-like 1 
 sot-r.1   102579128   E3 ubiquitin-protein ligase BRE1-like 2 
 nta-r.1   107766185   E3 ubiquitin-protein ligase BRE1-like 1 
 nta-r.1   107793770   E3 ubiquitin-protein ligase BRE1-like 2 
 nta-r.1   107793416   E3 ubiquitin-protein ligase BRE1-like 1 
 osa-u.5   4336589   E3 ubiquitin-protein ligase BRE1-like 1 
 osa-u.5   4349420   E3 ubiquitin-protein ligase BRE1-like 2 
 zma-u.5   100274688   uncharacterized LOC100274688 
 zma-u.5   103629598   E3 ubiquitin-protein ligase BRE1-like 1 
 zma-u.5   103626393   E3 ubiquitin-protein ligase BRE1-like 1 
 tae-r.2   123072319   E3 ubiquitin-protein ligase BRE1-like 2 
 tae-r.2   123062643   E3 ubiquitin-protein ligase BRE1-like 1 
 tae-r.2   123071466   E3 ubiquitin-protein ligase BRE1-like 1 
 hvu-r.1   123445404   E3 ubiquitin-protein ligase BRE1-like 2 
 hvu-r.1   123404399   E3 ubiquitin-protein ligase BRE1-like 1 
 hvu-r.1   123444859   E3 ubiquitin-protein ligase BRE1-like 1 
 sbi-r.1   8063816   E3 ubiquitin-protein ligase BRE1-like 1 
 sbi-r.1   8066523   E3 ubiquitin-protein ligase BRE1-like 2 
 bdi-r.1   100828493   E3 ubiquitin-protein ligase BRE1-like 2 
 bdi-r.1   100825148   E3 ubiquitin-protein ligase BRE1-like 1 
 cre-r.1   CHLRE_14g625802v5   uncharacterized protein 

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Top 50 coexpressed genes to 100790744 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100790744 (gma-u.5 coexpression data)

CoexMap"100790744"


gmaLOC100790744 | Entrez gene ID : 100790744      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 2 2 3 2 3 3 2 2 2 3 2 3 3 3 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0033503 [list] [network] HULC complex  (4 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (292 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3089 genes)  IEA  
Protein XP_006591212.1 [sequence] [blastp]
XP_014619590.1 [sequence] [blastp]
XP_040862728.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_006591212.1)
nucl 6,  cyto 4  (predict for XP_014619590.1)
nucl 8,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_040862728.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_006591212.1)
other 7  (predict for XP_014619590.1)
other 4,  mito 3  (predict for XP_040862728.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100790744
gma-r.7
for
100790744
gma-u.5
for
100790337
gma-u.5
for
100811776
gma-u.5
for
100796610
mtr-u.5
for
25494911
mtr-u.5
for
25484108
mtr-u.5
for
11436813
ppo-u.5
for
7453935
ppo-u.5
for
7455740
ath-u.5
for
HUB1
ath-u.5
for
HUB2
bra-r.6
for
103866184
bra-r.6
for
103832600
bra-r.6
for
103866851
vvi-u.5
for
100241021
vvi-u.5
for
100251829
ghi-r.1
for
121223688
ghi-r.1
for
107937439
ghi-r.1
for
107933771
bna-r.1
for
106396402
bna-r.1
for
106371217
bna-r.1
for
106433603
cit-r.1
for
102612288
cit-r.1
for
102624474
sly-u.5
for
101254859
sly-u.5
for
101264751
sot-r.1
for
102583070
sot-r.1
for
102579128
nta-r.1
for
107766185
nta-r.1
for
107793770
nta-r.1
for
107793416
osa-u.5
for
4336589
osa-u.5
for
4349420
zma-u.5
for
100274688
zma-u.5
for
103629598
zma-u.5
for
103626393
tae-r.2
for
123072319
tae-r.2
for
123062643
tae-r.2
for
123071466
hvu-r.1
for
123445404
hvu-r.1
for
123404399
hvu-r.1
for
123444859
sbi-r.1
for
8063816
sbi-r.1
for
8066523
bdi-r.1
for
100828493
bdi-r.1
for
100825148
cre-r.1
for
CHLRE_14g625802v5


Ortholog ID: 1919
Species gma gma gma mtr mtr mtr ppo ppo ath ath bra bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi cre
Symbol LOC100790337 LOC100811776 LOC100796610 LOC25484108 LOC11436813 LOC11438680 LOC7453935 LOC18105143 HUB1 HUB2 LOC103866184 LOC103832600 LOC103866851 LOC100241021 LOC100251829 LOC121223688 LOC107923465 LOC121219845 LOC106433603 LOC106443573 LOC106450768 LOC102612288 LOC102624474 LOC101254859 LOC101264751 LOC102583070 LOC102579128 LOC107793770 LOC107793416 LOC107783068 LOC4336589 LOC4349420 LOC100274688 LOC103629598 LOC103626393 LOC123072319 LOC123145047 LOC123063337 LOC123445404 LOC123404399 LOC123444859 LOC8063816 LOC8066523 LOC100828493 LOC100825148 CHLRE_14g625802v5
Function* E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 histone mono-ubiquitination 1 histone mono-ubiquitination 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 uncharacterized LOC100274688 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 3
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 6
bdi03040 Spliceosome 4
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100790337 100811776 100796610 25484108 11436813 11438680 7453935 18105143 819104 841968 103866184 103832600 103866851 100241021 100251829 121223688 107923465 121219845 106433603 106443573 106450768 102612288 102624474 101254859 101264751 102583070 102579128 107793770 107793416 107783068 4336589 4349420 100274688 103629598 103626393 123072319 123145047 123063337 123445404 123404399 123444859 8063816 8066523 100828493 100825148 5718396
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