ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100804535	pentatricopeptide repeat-containing protein At4g02750
gma-r.7	100804535	pentatricopeptide repeat-containing protein At4g02750
gma-u.5	100804011	pentatricopeptide repeat-containing protein At4g02750
mtr-u.5	11408118	pentatricopeptide repeat-containing protein At4g02750
mtr-u.5	11406572	pentatricopeptide repeat-containing protein At4g02750
ppo-u.5	7493498	pentatricopeptide repeat-containing protein At4g02750
ath-u.5	AT4G02750	Tetratricopeptide repeat (TPR)-like superfamily protein
bra-r.6	103871457	pentatricopeptide repeat-containing protein At4g02750
ghi-r.1	107941460	pentatricopeptide repeat-containing protein At4g02750
ghi-r.1	107931014	pentatricopeptide repeat-containing protein At4g02750
bna-r.1	111216225	pentatricopeptide repeat-containing protein At4g02750
bna-r.1	125610142	pentatricopeptide repeat-containing protein At4g02750
cit-r.1	102614890	pentatricopeptide repeat-containing protein At4g02750
sly-u.5	101267510	pentatricopeptide repeat-containing protein At4g02750
sot-r.1	102581152	pentatricopeptide repeat-containing protein At4g02750
nta-r.1	107814457	uncharacterized LOC107814457
nta-r.1	107822832	putative pentatricopeptide repeat-containing protein At5g52630
osa-u.5	4346745	pentatricopeptide repeat-containing protein At4g02750
zma-u.5	103632574	pentatricopeptide repeat-containing protein
hvu-r.1	123395496	pentatricopeptide repeat-containing protein At4g02750
bdi-r.1	104585084	pentatricopeptide repeat-containing protein At4g02750

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(407 genes)

IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(10455 genes)

IEA

GO MF

GO:0008270 [list] [network] zinc ion binding	(1182 genes)	IEA
GO:0003723 [list] [network] RNA binding	(2019 genes)	IEA
GO:0005515 [list] [network] protein binding	(7243 genes)	IEA

Protein

XP_003524347.1 [sequence] [blastp]
XP_006580405.1 [sequence] [blastp]

Subcellular
localization
wolf

pero 5, mito 4	(predict for XP_003524347.1)
pero 5, mito 4	(predict for XP_006580405.1)

Subcellular
localization
TargetP

mito 7	(predict for XP_003524347.1)
mito 7	(predict for XP_006580405.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100804535	gma-r.7 for 100804535	gma-u.5 for 100804011	mtr-u.5 for 11408118	mtr-u.5 for 11406572	ppo-u.5 for 7493498	ath-u.5 for AT4G02750	bra-r.6 for 103871457	ghi-r.1 for 107941460	ghi-r.1 for 107931014	bna-r.1 for 111216225	bna-r.1 for 125610142	cit-r.1 for 102614890	sly-u.5 for 101267510	sot-r.1 for 102581152	nta-r.1 for 107814457	nta-r.1 for 107822832	osa-u.5 for 4346745	zma-u.5 for 103632574	hvu-r.1 for 123395496	bdi-r.1 for 104585084