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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1  123395496  pentatricopeptide repeat-containing protein At4g02750 
 osa-u.5  4346745  pentatricopeptide repeat-containing protein At4g02750 
 zma-u.5  103632574  pentatricopeptide repeat-containing protein 
 ath-u.5  AT4G02750  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100804535  pentatricopeptide repeat-containing protein At4g02750 
 gma-u.5  100804011  pentatricopeptide repeat-containing protein At4g02750 
 sly-u.5  101267510  pentatricopeptide repeat-containing protein At4g02750 
 ppo-u.5  7493498  pentatricopeptide repeat-containing protein At4g02750 
 mtr-u.5  11408118  pentatricopeptide repeat-containing protein At4g02750 
 mtr-u.5  11406572  pentatricopeptide repeat-containing protein At4g02750 

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Top 50 coexpressed genes to 123395496 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123395496 (hvu-r.1 coexpression data)

CoexMap"123395496"


hvuLOC123395496 | Entrez gene ID : 123395496
Species hvu osa zma ath gma sly ppo mtr vvi bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (393 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (708 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044946434.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 5,  chlo 4  (predict for XP_044946434.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_044946434.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

hvu-r.1
for
123395496


osa-u.5
for
4346745


zma-u.5
for
103632574


ath-u.5
for
AT4G02750


gma-u.5
for
100804535


gma-u.5
for
100804011


sly-u.5
for
101267510


ppo-u.5
for
7493498


mtr-u.5
for
11408118


mtr-u.5
for
11406572



Ortholog ID: 10210
Species hvu bdi osa zma ath gma gma sly bra ppo mtr mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123395496 LOC104585084 LOC4346745 LOC103632574 AT4G02750 LOC100804011 LOC100804535 LOC101267510 LOC103871457 LOC7493498 LOC11406572 LOC11408118 LOC107941460 LOC107931014 LOC111216225 LOC125610142 LOC102581152 LOC102614890 LOC107814457 LOC107822832
Function* pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 uncharacterized LOC107814457 putative pentatricopeptide repeat-containing protein At5g52630
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123395496 104585084 4346745 103632574 828187 100804011 100804535 101267510 103871457 7493498 11406572 11408118 107941460 107931014 111216225 125610142 102581152 102614890 107814457 107822832
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