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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11408118   pentatricopeptide repeat-containing protein At4g02750 
 mtr-r.5   11408118   pentatricopeptide repeat-containing protein At4g02750 
 mtr-m.5   11408118   pentatricopeptide repeat-containing protein At4g02750 
 mtr-u.5   11406572   pentatricopeptide repeat-containing protein At4g02750 
 gma-u.5   100804011   pentatricopeptide repeat-containing protein At4g02750 
 gma-u.5   100804535   pentatricopeptide repeat-containing protein At4g02750 
 ppo-u.5   7493498   pentatricopeptide repeat-containing protein At4g02750 
 ath-u.5   AT4G02750   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103871457   pentatricopeptide repeat-containing protein At4g02750 
 ghi-r.1   107941460   pentatricopeptide repeat-containing protein At4g02750 
 ghi-r.1   107931014   pentatricopeptide repeat-containing protein At4g02750 
 bna-r.1   111216225   pentatricopeptide repeat-containing protein At4g02750 
 bna-r.1   125610142   pentatricopeptide repeat-containing protein At4g02750 
 cit-r.1   102614890   pentatricopeptide repeat-containing protein At4g02750 
 sly-u.5   101267510   pentatricopeptide repeat-containing protein At4g02750 
 sot-r.1   102581152   pentatricopeptide repeat-containing protein At4g02750 
 nta-r.1   107814457   uncharacterized LOC107814457 
 nta-r.1   107822832   putative pentatricopeptide repeat-containing protein At5g52630 
 osa-u.5   4346745   pentatricopeptide repeat-containing protein At4g02750 
 zma-u.5   103632574   pentatricopeptide repeat-containing protein 
 hvu-r.1   123395496   pentatricopeptide repeat-containing protein At4g02750 
 bdi-r.1   104585084   pentatricopeptide repeat-containing protein At4g02750 

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Top 50 coexpressed genes to 11408118 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11408118 (mtr-u.5 coexpression data)

CoexMap"11408118"


mtrLOC11408118 | Entrez gene ID : 11408118      
Species mtr gma ppo ath bra ghi bna cit sly sot nta osa zma hvu bdi cre tae sbi vvi
Paralog 4 2 1 1 1 2 2 1 1 1 2 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (919 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_024627379.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 3  (predict for XP_024627379.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_024627379.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11408118
mtr-r.5
for
11408118
mtr-m.5
for
11408118
mtr-u.5
for
11406572
gma-u.5
for
100804011
gma-u.5
for
100804535
ppo-u.5
for
7493498
ath-u.5
for
AT4G02750
bra-r.6
for
103871457
ghi-r.1
for
107941460
ghi-r.1
for
107931014
bna-r.1
for
111216225
bna-r.1
for
125610142
cit-r.1
for
102614890
sly-u.5
for
101267510
sot-r.1
for
102581152
nta-r.1
for
107814457
nta-r.1
for
107822832
osa-u.5
for
4346745
zma-u.5
for
103632574
hvu-r.1
for
123395496
bdi-r.1
for
104585084


Ortholog ID: 10210
Species mtr mtr gma gma ppo ath bra ghi ghi bna bna cit sly sot nta nta osa zma hvu bdi
Symbol LOC11408118 LOC11406572 LOC100804011 LOC100804535 LOC7493498 AT4G02750 LOC103871457 LOC107941460 LOC107931014 LOC111216225 LOC125610142 LOC102614890 LOC101267510 LOC102581152 LOC107814457 LOC107822832 LOC4346745 LOC103632574 LOC123395496 LOC104585084
Function* pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750 uncharacterized LOC107814457 putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00240 Pyrimidine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11408118 11406572 100804011 100804535 7493498 828187 103871457 107941460 107931014 111216225 125610142 102614890 101267510 102581152 107814457 107822832 4346745 103632574 123395496 104585084
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