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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11428165   auxin-responsive protein SAUR50 
 mtr-r.5   11428165   auxin-responsive protein SAUR50 
 gma-u.5   100811860   pentatricopeptide repeat-containing protein At3g12770 
 gma-u.5   100798332   pentatricopeptide repeat-containing protein At3g12770 
 vvi-u.5   100266536   pentatricopeptide repeat-containing protein At3g14330-like 
 vvi-u.5   100253764   pentatricopeptide repeat-containing protein At3g12770 
 ghi-r.1   107927871   pentatricopeptide repeat-containing protein At3g12770 
 cit-r.1   102629420   pentatricopeptide repeat-containing protein At3g12770-like 
 sly-u.5   104649620   putative pentatricopeptide repeat-containing protein At3g23330 
 sot-r.1   102593121   putative pentatricopeptide repeat-containing protein At3g23330 
 nta-r.1   107770639   putative pentatricopeptide repeat-containing protein At1g03510 
 nta-r.1   107818256   putative pentatricopeptide repeat-containing protein At1g03510 
 zma-u.5   118472026   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 sbi-r.1   8068283   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 bdi-r.1   100832257   pentatricopeptide repeat-containing protein At3g12770 

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Top 50 coexpressed genes to 11428165 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11428165 (mtr-u.5 coexpression data)

CoexMap"11428165"


mtrLOC11428165 | Entrez gene ID : 11428165      
Species mtr gma vvi ghi cit sly sot nta zma sbi bdi osa bra tae ath bna hvu ppo cre
Paralog 2 2 2 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009733 [list] [network] response to auxin  (107 genes)  IEA  
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_024633788.1 [sequence] [blastp]
XP_024633789.1 [sequence] [blastp]
XP_024633791.1 [sequence] [blastp]
XP_024633793.1 [sequence] [blastp]
XP_039688144.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_024633788.1)
chlo 9,  chlo_mito 5  (predict for XP_024633789.1)
chlo 8,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_024633791.1)
cyto 5,  chlo 2,  nucl 1,  extr 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_024633793.1)
mito 4,  nucl 3,  cyto_mito 3,  cyto_nucl 2,  chlo 1,  cysk 1  (predict for XP_039688144.1)
Subcellular
localization
TargetP
other 5  (predict for XP_024633788.1)
other 5  (predict for XP_024633789.1)
scret 4  (predict for XP_024633791.1)
other 7  (predict for XP_024633793.1)
mito 6  (predict for XP_039688144.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11428165
mtr-r.5
for
11428165
gma-u.5
for
100811860
gma-u.5
for
100798332
vvi-u.5
for
100266536
vvi-u.5
for
100253764
ghi-r.1
for
107927871
cit-r.1
for
102629420
sly-u.5
for
104649620
sot-r.1
for
102593121
nta-r.1
for
107770639
nta-r.1
for
107818256
zma-u.5
for
118472026
sbi-r.1
for
8068283
bdi-r.1
for
100832257


Ortholog ID: 13006
Species mtr gma gma vvi vvi ghi cit sly sot nta nta zma sbi bdi
Symbol LOC11428165 LOC100811860 LOC100798332 LOC100266536 LOC100253764 LOC107927871 LOC102629420 LOC104649620 LOC102593121 LOC107770639 LOC107818256 LOC118472026 LOC8068283 LOC100832257
Function* auxin-responsive protein SAUR50 pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g14330-like pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770-like putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At1g03510 putative pentatricopeptide repeat-containing protein At1g03510 pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At3g12770
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11428165 100811860 100798332 100266536 100253764 107927871 102629420 104649620 102593121 107770639 107818256 118472026 8068283 100832257
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