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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  100811860  pentatricopeptide repeat-containing protein At3g12770 
 gma-r.7  100811860  pentatricopeptide repeat-containing protein At3g12770 
 gma-u.5  100798332  pentatricopeptide repeat-containing protein At3g12770 
 mtr-u.5  11428165  auxin-responsive protein SAUR50 
 vvi-u.5  100266536  pentatricopeptide repeat-containing protein At3g14330-like 
 vvi-u.5  100253764  pentatricopeptide repeat-containing protein At3g12770 
 sly-u.5  104649620  putative pentatricopeptide repeat-containing protein At3g23330 
 zma-u.5  118472026  pentatricopeptide repeat-containing protein At2g03880, mitochondrial 

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Top 50 coexpressed genes to 100811860 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100811860 (gma-u.5 coexpression data)

CoexMap"100811860"


gmaLOC100811860 | Entrez gene ID : 100811860
Species gma mtr vvi sly zma tae hvu cit bra ghi osa ppo sbi bdi ath nta bna cre sot
Paralog 3 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_014632402.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_014632402.1)
Subcellular
localization
TargetP
other 4  (predict for XP_014632402.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100811860


gma-r.7
for
100811860


gma-u.5
for
100798332


mtr-u.5
for
11428165


vvi-u.5
for
100266536


vvi-u.5
for
100253764


sly-u.5
for
104649620


zma-u.5
for
118472026



Ortholog ID: 13006
Species gma gma mtr vvi vvi ghi cit sly sot nta nta zma sbi bdi
Symbol LOC100811860 LOC100798332 LOC11428165 LOC100266536 LOC100253764 LOC107927871 LOC102629420 LOC104649620 LOC102593121 LOC107770639 LOC107818256 LOC118472026 LOC8068283 LOC100832257
Function* pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770 auxin-responsive protein SAUR50 pentatricopeptide repeat-containing protein At3g14330-like pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770-like putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At1g03510 putative pentatricopeptide repeat-containing protein At1g03510 pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At3g12770
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100811860 100798332 11428165 100266536 100253764 107927871 102629420 104649620 102593121 107770639 107818256 118472026 8068283 100832257
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