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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1  8068283  pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 zma-u.5  118472026  pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 gma-u.5  100811860  pentatricopeptide repeat-containing protein At3g12770 
 gma-u.5  100798332  pentatricopeptide repeat-containing protein At3g12770 
 sly-u.5  104649620  putative pentatricopeptide repeat-containing protein At3g23330 
 vvi-u.5  100266536  pentatricopeptide repeat-containing protein At3g14330-like 
 vvi-u.5  100253764  pentatricopeptide repeat-containing protein At3g12770 
 mtr-u.5  11428165  auxin-responsive protein SAUR50 

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Top 50 coexpressed genes to 8068283 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8068283 (sbi-r.1 coexpression data)

CoexMap"8068283"


sbiLOC8068283 | Entrez gene ID : 8068283
Species sbi zma gma sly vvi mtr bra nta osa cre cit hvu ppo bdi sot tae ath bna ghi
Paralog 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002451454.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002451454.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002451454.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sbi-r.1
for
8068283

.

zma-u.5
for
118472026

.

gma-u.5
for
100811860

.

gma-u.5
for
100798332

.

sly-u.5
for
104649620

.

vvi-u.5
for
100266536

.

vvi-u.5
for
100253764

.

mtr-u.5
for
11428165

.


Ortholog ID: 13006
Species gma gma sly zma vvi vvi mtr ghi sbi sot cit bdi nta nta
Symbol LOC100811860 LOC100798332 LOC104649620 LOC118472026 LOC100266536 LOC100253764 LOC11428165 LOC107927871 LOC8068283 LOC102593121 LOC102629420 LOC100832257 LOC107770639 LOC107818256
Function* pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770 putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At3g14330-like pentatricopeptide repeat-containing protein At3g12770 auxin-responsive protein SAUR50 pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At2g03880, mitochondrial putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At3g12770-like pentatricopeptide repeat-containing protein At3g12770 putative pentatricopeptide repeat-containing protein At1g03510 putative pentatricopeptide repeat-containing protein At1g03510
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100811860 100798332 104649620 118472026 100266536 100253764 11428165 107927871 8068283 102593121 102629420 100832257 107770639 107818256
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