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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25489600   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 mtr-r.5   25489600   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 mtr-u.5   11422507   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 gma-u.5   100806552   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 ppo-u.5   7475530   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 ath-u.5   AT2G01440   DEAD/DEAH box RNA helicase family protein 
 bra-r.6   103827589   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 vvi-u.5   100252614   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 ghi-r.1   107931919   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 ghi-r.1   107909918   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 bna-r.1   106406031   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 bna-r.1   125590716   ATP-dependent DNA helicase homolog RECG, chloroplastic-like 
 cit-r.1   102606824   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 sly-u.5   101251978   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 sot-r.1   102583700   ATP-dependent DNA helicase RecG 
 nta-r.1   107829301   ATP-dependent DNA helicase homolog RECG1, chloroplastic/mitochondrial 
 osa-u.5   4330491   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 zma-u.5   103627634   ATP-dependent DNA helicase homolog RECG chloroplastic 
 tae-r.2   123128158   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 tae-r.2   123137961   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 tae-r.2   123145259   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 hvu-r.1   123406336   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 sbi-r.1   8073842   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 bdi-r.1   100841141   ATP-dependent DNA helicase homolog RECG, chloroplastic 
 cre-r.1   CHLRE_01g021850v5   uncharacterized protein 

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Top 50 coexpressed genes to 25489600 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25489600 (mtr-u.5 coexpression data)

CoexMap""


mtrLOC25489600 | Entrez gene ID : 25489600      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 1 2 2 1 1 1 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
Function ATP-dependent DNA helicase homolog RECG, chloroplastic
KEGG mtr03440 [list] [network] Homologous recombination (67 genes)
GO BP
GO:0006310 [list] [network] DNA recombination  (134 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (347 genes)  IEA  
GO CC
GO MF
GO:0003678 [list] [network] DNA helicase activity  (114 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2502 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4267 genes)  IEA  
Protein XP_039688012.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  mito 1,  plas 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_039688012.1)
Subcellular
localization
TargetP
other 9  (predict for XP_039688012.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25489600
mtr-r.5
for
25489600
mtr-u.5
for
11422507
gma-u.5
for
100806552
ppo-u.5
for
7475530
ath-u.5
for
AT2G01440
bra-r.6
for
103827589
vvi-u.5
for
100252614
ghi-r.1
for
107931919
ghi-r.1
for
107909918
bna-r.1
for
106406031
bna-r.1
for
125590716
cit-r.1
for
102606824
sly-u.5
for
101251978
sot-r.1
for
102583700
nta-r.1
for
107829301
osa-u.5
for
4330491
zma-u.5
for
103627634
tae-r.2
for
123128158
tae-r.2
for
123137961
tae-r.2
for
123145259
hvu-r.1
for
123406336
sbi-r.1
for
8073842
bdi-r.1
for
100841141
cre-r.1
for
CHLRE_01g021850v5

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Ortholog ID: 10641
Species mtr mtr gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC25489600 LOC11422507 LOC100806552 LOC7475530 AT2G01440 LOC103827589 LOC100252614 LOC107931919 LOC107909918 LOC106406031 LOC125590716 LOC102606824 LOC101251978 LOC102583700 LOC107829301 LOC4330491 LOC103627634 LOC123128158 LOC123137961 LOC123145259 LOC123406336 LOC8073842 LOC100841141 CHLRE_01g021850v5
Function* ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic DEAD/DEAH box RNA helicase family protein ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic-like ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase RecG ATP-dependent DNA helicase homolog RECG1, chloroplastic/mitochondrial ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic ATP-dependent DNA helicase homolog RECG, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna03082 ATP-dependent chromatin remodeling 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna03082 ATP-dependent chromatin remodeling 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 5
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25489600 11422507 100806552 7475530 814672 103827589 100252614 107931919 107909918 106406031 125590716 102606824 101251978 102583700 107829301 4330491 103627634 123128158 123137961 123145259 123406336 8073842 100841141 66052026
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