ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107909918	ATP-dependent DNA helicase homolog RECG, chloroplastic
ghi-r.1	107931919	ATP-dependent DNA helicase homolog RECG, chloroplastic
ath-u.5	AT2G01440	DEAD/DEAH box RNA helicase family protein
bra-r.6	103827589	ATP-dependent DNA helicase homolog RECG, chloroplastic
bna-r.1	106406031	ATP-dependent DNA helicase homolog RECG, chloroplastic
bna-r.1	125590716	ATP-dependent DNA helicase homolog RECG, chloroplastic-like
cit-r.1	102606824	ATP-dependent DNA helicase homolog RECG, chloroplastic
gma-u.5	100806552	ATP-dependent DNA helicase homolog RECG, chloroplastic
vvi-u.5	100252614	ATP-dependent DNA helicase homolog RECG, chloroplastic
ppo-u.5	7475530	ATP-dependent DNA helicase homolog RECG, chloroplastic
mtr-u.5	25489600	ATP-dependent DNA helicase homolog RECG, chloroplastic
mtr-u.5	11422507	ATP-dependent DNA helicase homolog RECG, chloroplastic
sly-u.5	101251978	ATP-dependent DNA helicase homolog RECG, chloroplastic
sot-r.1	102583700	ATP-dependent DNA helicase RecG
nta-r.1	107829301	ATP-dependent DNA helicase homolog RECG1, chloroplastic/mitochondrial
osa-u.5	4330491	ATP-dependent DNA helicase homolog RECG, chloroplastic
zma-u.5	103627634	ATP-dependent DNA helicase homolog RECG chloroplastic
tae-r.2	123145259	ATP-dependent DNA helicase homolog RECG, chloroplastic
tae-r.2	123137961	ATP-dependent DNA helicase homolog RECG, chloroplastic
tae-r.2	123128158	ATP-dependent DNA helicase homolog RECG, chloroplastic
hvu-r.1	123406336	ATP-dependent DNA helicase homolog RECG, chloroplastic
sbi-r.1	8073842	ATP-dependent DNA helicase homolog RECG, chloroplastic
bdi-r.1	100841141	ATP-dependent DNA helicase homolog RECG, chloroplastic
cre-r.1	CHLRE_01g021850v5	uncharacterized protein

Annotation

functional annotation

KEGG

ghi03440 [list] [network] Homologous recombination (106 genes)

GO BP

GO:0006310 [list] [network] DNA recombination	(262 genes)	IEA
GO:0006281 [list] [network] DNA repair	(557 genes)	IEA

GO CC

GO MF

GO:0003678 [list] [network] DNA helicase activity	(73 genes)	IEA
GO:0005524 [list] [network] ATP binding	(5155 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(9083 genes)	IEA

Protein

XP_016693112.1 [sequence] [blastp]
XP_016693113.1 [sequence] [blastp]
XP_040944746.1 [sequence] [blastp]
XP_040944747.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, chlo 3, plas 1, nucl 1, mito 1, golg 1, cysk_plas 1, E.R._plas 1, cyto_plas 1	(predict for XP_016693112.1)
vacu 4, chlo 3, plas 1, nucl 1, mito 1, golg 1, cysk_plas 1, E.R._plas 1, cyto_plas 1	(predict for XP_016693113.1)
vacu 4, chlo 3, plas 1, nucl 1, mito 1, golg 1, cysk_plas 1, E.R._plas 1, cyto_plas 1	(predict for XP_040944746.1)
vacu 4, chlo 3, golg 1, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1	(predict for XP_040944747.1)

Subcellular
localization
TargetP

scret 2	(predict for XP_016693112.1)
scret 2	(predict for XP_016693113.1)
scret 2	(predict for XP_040944746.1)
scret 2	(predict for XP_040944747.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107909918	ghi-r.1 for 107931919	ath-u.5 for AT2G01440	bra-r.6 for 103827589	bna-r.1 for 106406031	bna-r.1 for 125590716	cit-r.1 for 102606824	gma-u.5 for 100806552	vvi-u.5 for 100252614	ppo-u.5 for 7475530	mtr-u.5 for 25489600	mtr-u.5 for 11422507	sly-u.5 for 101251978	sot-r.1 for 102583700	nta-r.1 for 107829301	osa-u.5 for 4330491	zma-u.5 for 103627634	tae-r.2 for 123145259	tae-r.2 for 123137961	tae-r.2 for 123128158	hvu-r.1 for 123406336	sbi-r.1 for 8073842	bdi-r.1 for 100841141	cre-r.1 for CHLRE_01g021850v5

Ortholog

Ortholog ID: 10641

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*