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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25492816   pentatricopeptide repeat-containing protein At1g50270 
 mtr-r.5   25492816   pentatricopeptide repeat-containing protein At1g50270 
 gma-u.5   100819113   pentatricopeptide repeat-containing protein At1g50270 
 ath-u.5   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107903942   pentatricopeptide repeat-containing protein At1g50270 
 ghi-r.1   107955710   pentatricopeptide repeat-containing protein At1g50270 
 sly-u.5   101253949   pentatricopeptide repeat-containing protein At1g50270 
 sot-r.1   107061198   pentatricopeptide repeat-containing protein At1g50270 
 nta-r.1   107790084   pentatricopeptide repeat-containing protein At1g50270-like 
 nta-r.1   107800534   pentatricopeptide repeat-containing protein At1g50270-like 

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Top 50 coexpressed genes to 25492816 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25492816 (mtr-u.5 coexpression data)

CoexMap"25492816"


mtrLOC25492816 | Entrez gene ID : 25492816      
Species mtr gma ath ghi sly sot nta sbi osa cit bra tae bna hvu ppo vvi zma cre bdi
Paralog 2 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013456512.1 [sequence] [blastp]
XP_024637099.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_013456512.1)
chlo 9  (predict for XP_024637099.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_013456512.1)
mito 6  (predict for XP_024637099.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25492816
mtr-r.5
for
25492816
gma-u.5
for
100819113
ath-u.5
for
AT1G50270
ghi-r.1
for
107903942
ghi-r.1
for
107955710
sly-u.5
for
101253949
sot-r.1
for
107061198
nta-r.1
for
107790084
nta-r.1
for
107800534


Ortholog ID: 15241
Species mtr gma ath ghi ghi sly sot nta nta
Symbol LOC25492816 LOC100819113 AT1G50270 LOC107903942 LOC107955710 LOC101253949 LOC107061198 LOC107790084 LOC107800534
Function* pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270-like pentatricopeptide repeat-containing protein At1g50270-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25492816 100819113 841449 107903942 107955710 101253949 107061198 107790084 107800534
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